RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CDC37Q16543 378 aaPredicted RBP14.99□□□□□ -0.01
CPNE1-225ENST00000483495 ENOX1Q8TC92 643 aaKnown RBP14.99□□□□□ -0.01
CPNE1-225ENST00000483495 MTMR9Q96QG7 549 aa14.99□□□□□ -0.01
CPNE1-225ENST00000483495 VEZTQ9HBM0 779 aa14.99□□□□□ -0.01
CPNE1-225ENST00000483495 MYOZ2Q9NPC6 264 aa14.99□□□□□ -0.01
CPNE1-225ENST00000483495 NRBP1Q9UHY1 535 aa14.99□□□□□ -0.01
CPNE1-225ENST00000483495 BMP3P12645 472 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 RPS12P25398 132 aaKnown RBP14.98□□□□□ -0.01
CPNE1-225ENST00000483495 NAALADL2Q58DX5 795 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 PPP4R3AQ6IN85 833 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 PSTPIP2Q9H939 334 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 ARHGEF10LQ9HCE6 1279 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 TMX2Q9Y320 296 aa14.98□□□□□ -0.01
CPNE1-225ENST00000483495 LMOD1P29536 600 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-225ENST00000483495 CDC25AP30304 524 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 UBA7P41226 1012 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 KARSQ15046 597 aaKnown RBP14.97□□□□□ -0.01
CPNE1-225ENST00000483495 CCDC144BQ3MJ40 725 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 SYDE2Q5VT97 1194 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 IGSF22Q8N9C0 903 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 CUEDC2Q9H467 287 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 ZBTB21Q9ULJ3 1066 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 PP2D1A8MPX8 630 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 RAD21O60216 631 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 MYL1P05976 194 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 CASP1P29466 404 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 STAT6P42226 847 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 FANCCQ00597 558 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 FMR1Q06787 632 aaKnown RBP eCLIP14.97□□□□□ -0.01
CPNE1-225ENST00000483495 UBE2SQ16763 222 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 NBPF9Q3BBW0 867 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 RRAGBQ5VZM2 374 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-225ENST00000483495 XPO4Q9C0E2 1151 aaKnown RBP14.97□□□□□ -0.01
CPNE1-225ENST00000483495 MAGEF1Q9HAY2 307 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 IFNKQ9P0W0 207 aa14.97□□□□□ -0.01
CPNE1-225ENST00000483495 TMEM232C9JQI7 657 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 GCFC2P16383 781 aaKnown RBP14.96□□□□□ -0.01
CPNE1-225ENST00000483495 ZNF18P17022 549 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 TNNI2P48788 182 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
CPNE1-225ENST00000483495 SEMA3FQ13275 785 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 R3HDM1Q15032 1099 aaKnown RBP14.96□□□□□ -0.01
CPNE1-225ENST00000483495 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 KIAA1524Q8TCG1 905 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 MED15Q96RN5 788 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 NAP1L4Q99733 375 aaKnown RBP14.96□□□□□ -0.01
CPNE1-225ENST00000483495 AMNQ9BXJ7 453 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 KBTBD4Q9NVX7 518 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 FANCLQ9NW38 375 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 IMPACTQ9P2X3 320 aa14.96□□□□□ -0.01
CPNE1-225ENST00000483495 SLC37A4O43826 429 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 OFD1O75665 1012 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 TDP2O95551 362 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 CAP2P40123 477 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 ECE1P42892 770 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 CUL4BQ13620 913 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 CALCRLQ16602 461 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 MCTP2Q6DN12 878 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 CABP7Q86V35 215 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 TEX2Q8IWB9 1127 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 SPTLC3Q9NUV7 552 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 GOLGB1Q14789 3259 aaKnown RBP14.95□□□□□ -0.02
CPNE1-225ENST00000483495 SHTN1A0MZ66 631 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 PPP1R3GB7ZBB8 358 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 PTGER2P43116 358 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 AP3B2Q13367 1082 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 PDIA5Q14554 519 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 ACER1Q8TDN7 264 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 STAMQ92783 540 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 GOPCQ9HD26 462 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 RMND1Q9NWS8 449 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 PYCARDQ9ULZ3 195 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 BCS1LQ9Y276 419 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 NFE2L3Q9Y4A8 694 aa14.95□□□□□ -0.02
CPNE1-225ENST00000483495 FZD9O00144 591 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 MEIS2O14770 477 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 CBFA2T2O43439 604 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 PLA2G6O60733 806 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
CPNE1-225ENST00000483495 TECP42680 631 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 KIAA1755Q5JYT7 1200 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 FBXO11Q86XK2 927 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 LRRC15Q8TF66 581 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 CACTINQ8WUQ7 758 aaKnown RBP14.94□□□□□ -0.02
CPNE1-225ENST00000483495 DPF2Q92785 391 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 MMTAG2Q9BU76 263 aaKnown RBP14.94□□□□□ -0.02
CPNE1-225ENST00000483495 BLZF1Q9H2G9 400 aa14.94□□□□□ -0.02
CPNE1-225ENST00000483495 PPP1R1BQ9UD71 204 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-225ENST00000483495 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
CPNE1-225ENST00000483495 USP11P51784 963 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 GSDMDP57764 484 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 TNFAIP1Q13829 316 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 KCNB1Q14721 858 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
CPNE1-225ENST00000483495 CRYGNQ8WXF5 182 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms