RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 SNHG28P0DPA3 235 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 CHMLP26374 656 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 ACLYP53396 1101 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 BAATQ14032 418 aaPredicted RBP25.23■■□□□ 1.63
SYPL1-206ENST00000483448 TDHQ8IZJ6 230 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 NUP133Q8WUM0 1156 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 VTI1AQ96AJ9 217 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 UBA5Q9GZZ9 404 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 PNMA2Q9UL42 364 aa25.23■■□□□ 1.63
SYPL1-206ENST00000483448 RAD50Q92878 1312 aa25.22■■□□□ 1.63
SYPL1-206ENST00000483448 PTPDC1A2A3K4 754 aa25.22■■□□□ 1.63
SYPL1-206ENST00000483448 TLE2Q04725 743 aa25.22■■□□□ 1.63
SYPL1-206ENST00000483448 SNX17Q15036 470 aa25.22■■□□□ 1.63
SYPL1-206ENST00000483448 KLHDC9Q8NEP7 349 aa25.22■■□□□ 1.63
SYPL1-206ENST00000483448 RANBP2P49792 3224 aaKnown RBP25.21■■□□□ 1.63
SYPL1-206ENST00000483448 TNKSO95271 1327 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 SOX1O00570 391 aaPredicted RBP25.21■■□□□ 1.63
SYPL1-206ENST00000483448 TNFAIP2Q03169 654 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 TRDNQ13061 729 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 C1orf53Q5VUE5 145 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 EEPD1Q7L9B9 569 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 ENAHQ8N8S7 591 aaPredicted RBP25.21■■□□□ 1.63
SYPL1-206ENST00000483448 ANKS1AQ92625 1134 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 LRCH3Q96II8 777 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 PURBQ96QR8 312 aaKnown RBP25.21■■□□□ 1.63
SYPL1-206ENST00000483448 STARD7Q9NQZ5 370 aa25.21■■□□□ 1.63
SYPL1-206ENST00000483448 DDX49Q9Y6V7 483 aaKnown RBP25.21■■□□□ 1.63
SYPL1-206ENST00000483448 MYADML2A6NDP7 307 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 MOXD2PA6NHM9 499 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 NFIBO00712 420 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 IRX5P78411 483 aaPredicted RBP25.2■■□□□ 1.62
SYPL1-206ENST00000483448 GNASQ5JWF2 1037 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 PCSK9Q8NBP7 692 aaKnown RBP25.2■■□□□ 1.62
SYPL1-206ENST00000483448 KATNBL1Q9H079 304 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 CPVLQ9H3G5 476 aa25.2■■□□□ 1.62
SYPL1-206ENST00000483448 ADD3Q9UEY8 706 aaKnown RBP25.2■■□□□ 1.62
SYPL1-206ENST00000483448 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.19■■□□□ 1.62
SYPL1-206ENST00000483448 ADCY6O43306 1168 aa25.19■■□□□ 1.62
SYPL1-206ENST00000483448 PQBP1O60828 265 aaKnown RBP25.19■■□□□ 1.62
SYPL1-206ENST00000483448 CALML3P27482 149 aa25.19■■□□□ 1.62
SYPL1-206ENST00000483448 GJA9P57773 515 aa25.19■■□□□ 1.62
SYPL1-206ENST00000483448 PTH1RQ03431 593 aa25.19■■□□□ 1.62
SYPL1-206ENST00000483448 IFIT1BQ5T764 474 aaKnown RBP25.19■■□□□ 1.62
SYPL1-206ENST00000483448 U3KPZ7 1027 aaPredicted RBP25.19■■□□□ 1.62
SYPL1-206ENST00000483448 DNAH12Q6ZR08 3092 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 DHX16O60231 1041 aaKnown RBP25.18■■□□□ 1.62
SYPL1-206ENST00000483448 USH1GQ495M9 461 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 RNF207Q6ZRF8 634 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 SH3RF1Q7Z6J0 888 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 GLT1D1Q96MS3 346 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 AP5M1Q9H0R1 490 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 UPF3AQ9H1J1 476 aaKnown RBP25.18■■□□□ 1.62
SYPL1-206ENST00000483448 VAT1LQ9HCJ6 419 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 PDLIM7Q9NR12 457 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 MCM3APO60318 1980 aa25.18■■□□□ 1.62
SYPL1-206ENST00000483448 ASTN1O14525 1302 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 LAMA4Q16363 1823 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 ASGR1P07306 291 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 PARP1P09874 1014 aaKnown RBP25.17■■□□□ 1.62
SYPL1-206ENST00000483448 CST5P28325 142 aaPredicted RBP25.17■■□□□ 1.62
SYPL1-206ENST00000483448 ASPRV1Q53RT3 343 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 IQSEC1Q6DN90 963 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 CCSAPQ6IQ19 270 aaPredicted RBP25.17■■□□□ 1.62
SYPL1-206ENST00000483448 FBXO16Q8IX29 292 aaPredicted RBP25.17■■□□□ 1.62
SYPL1-206ENST00000483448 CLEC4DQ8WXI8 215 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 BADQ92934 168 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 PDGFCQ9NRA1 345 aa25.17■■□□□ 1.62
SYPL1-206ENST00000483448 WDR19Q8NEZ3 1342 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 TRIM43BA6NCK2 446 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 DCDC2CA8MYV0 355 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 DYNC1LI2O43237 492 aaPredicted RBP25.16■■□□□ 1.62
SYPL1-206ENST00000483448 CLTBP09497 229 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 BEX3Q00994 111 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 LRIT3Q3SXY7 679 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 SLC30A10Q6XR72 485 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 KIAA1211Q6ZU35 1233 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 ADGRF4Q8IZF3 695 aa25.16■■□□□ 1.62
SYPL1-206ENST00000483448 TRIM43Q96BQ3 446 aaPredicted RBP25.16■■□□□ 1.62
SYPL1-206ENST00000483448 ALDH5A1P51649 535 aaPredicted RBP25.15■■□□□ 1.62
SYPL1-206ENST00000483448 CDC37Q16543 378 aaPredicted RBP25.15■■□□□ 1.62
SYPL1-206ENST00000483448 CYB5R4Q7L1T6 521 aa25.15■■□□□ 1.62
SYPL1-206ENST00000483448 MPHOSPH6Q99547 160 aaKnown RBP25.15■■□□□ 1.62
SYPL1-206ENST00000483448 VTA1Q9NP79 307 aa25.15■■□□□ 1.62
SYPL1-206ENST00000483448 TMEM39AQ9NV64 488 aa25.15■■□□□ 1.62
SYPL1-206ENST00000483448 SGSM2O43147 1006 aa25.14■■□□□ 1.62
SYPL1-206ENST00000483448 CYP21A2P08686 494 aa25.14■■□□□ 1.62
SYPL1-206ENST00000483448 SMPD1P17405 629 aa25.14■■□□□ 1.62
SYPL1-206ENST00000483448 RPS6P62753 249 aaKnown RBP25.14■■□□□ 1.62
SYPL1-206ENST00000483448 TAPT1Q6NXT6 567 aa25.14■■□□□ 1.62
SYPL1-206ENST00000483448 RALYLQ86SE5 291 aaKnown RBP25.14■■□□□ 1.62
SYPL1-206ENST00000483448 TLK2Q86UE8 772 aa25.14■■□□□ 1.62
SYPL1-206ENST00000483448 ELP1O95163 1332 aa25.13■■□□□ 1.61
SYPL1-206ENST00000483448 ERICH2A1L162 156 aa25.13■■□□□ 1.61
SYPL1-206ENST00000483448 ZEB2O60315 1214 aa25.13■■□□□ 1.61
SYPL1-206ENST00000483448 RAG1P15918 1043 aa25.13■■□□□ 1.61
SYPL1-206ENST00000483448 MORC4Q8TE76 937 aa25.13■■□□□ 1.61
SYPL1-206ENST00000483448 GNEQ9Y223 722 aaKnown RBP25.13■■□□□ 1.61
SYPL1-206ENST00000483448 B4DLN1 442 aa25.12■■□□□ 1.61
SYPL1-206ENST00000483448 IFIT3O14879 490 aaKnown RBP25.12■■□□□ 1.61
SYPL1-206ENST00000483448 MRPL12P52815 198 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms