RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DGKHQ86XP1 1220 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 C7orf61Q8IZ16 206 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 UBAC1Q9BSL1 405 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZSWIM5Q9P217 1185 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SMCHD1A6NHR9 2005 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 CCDC178Q5BJE1 867 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 BTNL9Q6UXG8 535 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ENAHQ8N8S7 591 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 RANBP17Q9H2T7 1088 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ICAM1P05362 532 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 GOLGA8HP0CJ92 632 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 COL6A1P12109 1028 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 MCM5P33992 734 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 TKFCQ3LXA3 575 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 A1CFQ9NQ94 594 aaKnown RBP11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 ZHX1Q9UKY1 873 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQA1-206ENST00000482745 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 DNAH12Q6ZR08 3092 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 POTEB2H3BUK9 544 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 DNM1LO00429 736 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CYP21A2P08686 494 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 SNHG28P0DPA3 235 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ZNF445P59923 1031 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CNTN2Q02246 1040 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 TRDNQ13061 729 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 MUM1L1Q5H9M0 696 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 FAM13BQ9NYF5 915 aa11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.54
HLA-DQA1-206ENST00000482745 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ZNF865P0CJ78 1059 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 RARBP10826 455 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 RBM10P98175 930 aaKnown RBP11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 GPATCH4Q5T3I0 446 aaKnown RBP11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 LENG1Q96BZ8 264 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 FGD4Q96M96 766 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CPVLQ9H3G5 476 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 LCTP09848 1927 aa11.7□□□□□ -0.54
HLA-DQA1-206ENST00000482745 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 UQCRHP07919 91 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 AKR1A1P14550 325 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CYB5R4Q7L1T6 521 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 RALYLQ86SE5 291 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 XPNPEP3Q9NQH7 507 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 R3HCC1Q9Y3T6 440 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 TAF6LQ9Y6J9 622 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 MYH6P13533 1939 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 UTP14CQ5TAP6 766 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 PDLIM2Q96JY6 352 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 UBA5Q9GZZ9 404 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 LRRC37A2A6NM11 1700 aa11.69□□□□□ -0.54
HLA-DQA1-206ENST00000482745 E7EWF7 191 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 NFIBO00712 420 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 PGK1P00558 417 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 SYN1P17600 705 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 LRRC41Q15345 812 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ASPRV1Q53RT3 343 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 MAP4K1Q92918 833 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 TRIOBPQ9H2D6 2365 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 PARP1P09874 1014 aaKnown RBP11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ACVR2BQ13705 512 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 USH1GQ495M9 461 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 STOX1Q6ZVD7 989 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
HLA-DQA1-206ENST00000482745 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms