RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 SENP6Q9GZR1 1112 aaPredicted RBP12.1□□□□□ -0.47
CDK11A-216ENST00000479362 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
CDK11A-216ENST00000479362 GOLGA8AA7E2F4 631 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 CALM1P0DP23 149 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 CALM2P0DP24 149 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 CALM3P0DP25 149 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 PDIA3P30101 505 aaKnown RBP12.09□□□□□ -0.47
CDK11A-216ENST00000479362 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-216ENST00000479362 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDK11A-216ENST00000479362 RCAN1P53805 252 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-216ENST00000479362 RTP1P59025 263 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 STK3Q13188 491 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 ME3Q16798 604 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 NUP133Q8WUM0 1156 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 PPM1EQ8WY54 764 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 BADQ92934 168 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 MKL1Q969V6 931 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 SLKQ9H2G2 1235 aaPredicted RBP12.09□□□□□ -0.47
CDK11A-216ENST00000479362 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 AGTPBP1Q9UPW5 1226 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
CDK11A-216ENST00000479362 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 RAD21O60216 631 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 PFKFB2O60825 505 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 RXRAP19793 462 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 CYP2B6P20813 491 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 TROAPQ12815 778 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
CDK11A-216ENST00000479362 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 ZNF280CQ8ND82 737 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 GMCL1P1Q8NEA9 526 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
CDK11A-216ENST00000479362 WDR18Q9BV38 432 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 EPHX3Q9H6B9 360 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
CDK11A-216ENST00000479362 CFAP54Q96N23 3096 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 NDUFB10O96000 172 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
CDK11A-216ENST00000479362 DNAJB2P25686 324 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 KIF5BP33176 963 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
CDK11A-216ENST00000479362 SPP2Q13103 211 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
CDK11A-216ENST00000479362 MTMR2Q13614 643 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 GRM4Q14833 912 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 RTN1Q16799 776 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 RASGRP2Q7LDG7 609 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 NECAB1Q8N987 351 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 GTF3C6Q969F1 213 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 CHMP4CQ96CF2 233 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 KIAA1683Q9H0B3 1180 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 ZNF576Q9H609 170 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
CDK11A-216ENST00000479362 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
CDK11A-216ENST00000479362 PDHBP11177 359 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 USP14P54578 494 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 SCRN1Q12765 414 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 CCDC96Q2M329 555 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 FANCBQ8NB91 859 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 RNPC3Q96LT9 517 aaKnown RBP12.06□□□□□ -0.48
CDK11A-216ENST00000479362 NCOA5Q9HCD5 579 aaKnown RBP12.06□□□□□ -0.48
CDK11A-216ENST00000479362 C11orf16Q9NQ32 467 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
CDK11A-216ENST00000479362 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
CDK11A-216ENST00000479362 PCDHB8Q9UN66 801 aa12.06□□□□□ -0.48
CDK11A-216ENST00000479362 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 F5H6K3 240 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 CPLX1O14810 134 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 DHX16O60231 1041 aaKnown RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 SNHG28P0DPA3 235 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 BMP1P13497 986 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 CDC27P30260 824 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 SLC1A4P43007 532 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 GCLCP48506 637 aaPredicted RBP12.05□□□□□ -0.48
CDK11A-216ENST00000479362 EPHB4P54760 987 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 HMGCS2P54868 508 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 BACE1P56817 501 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 KLRC3Q07444 240 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 ST3GAL1Q11201 340 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 PPP2R5BQ15173 497 aa12.05□□□□□ -0.48
CDK11A-216ENST00000479362 CCL14Q16627 93 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms