RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 CALML3P27482 149 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 BAATQ14032 418 aaPredicted RBP22.35■■□□□ 1.17
EPHB4-205ENST00000478459 TKFCQ3LXA3 575 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 NOL8Q76FK4 1167 aaKnown RBP22.35■■□□□ 1.17
EPHB4-205ENST00000478459 RNF180Q86T96 592 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 UBAC1Q9BSL1 405 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 KRT23Q9C075 422 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 NRBP1Q9UHY1 535 aa22.35■■□□□ 1.17
EPHB4-205ENST00000478459 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
EPHB4-205ENST00000478459 CYP21A2P08686 494 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 TMEM63BQ5T3F8 832 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 SLC30A10Q6XR72 485 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
EPHB4-205ENST00000478459 ZNF467Q7Z7K2 595 aaPredicted RBP22.34■■□□□ 1.17
EPHB4-205ENST00000478459 DGKHQ86XP1 1220 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 GDF15Q99988 308 aa22.34■■□□□ 1.17
EPHB4-205ENST00000478459 RAD50Q92878 1312 aa22.33■■□□□ 1.17
EPHB4-205ENST00000478459 SGSM2O43147 1006 aa22.33■■□□□ 1.17
EPHB4-205ENST00000478459 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
EPHB4-205ENST00000478459 FBXO16Q8IX29 292 aaPredicted RBP22.33■■□□□ 1.17
EPHB4-205ENST00000478459 MSL3Q8N5Y2 521 aaKnown RBP22.33■■□□□ 1.17
EPHB4-205ENST00000478459 UBE2OQ9C0C9 1292 aaKnown RBP22.33■■□□□ 1.17
EPHB4-205ENST00000478459 ABHD16BQ9H3Z7 469 aa22.33■■□□□ 1.17
EPHB4-205ENST00000478459 PDGFCQ9NRA1 345 aa22.33■■□□□ 1.17
EPHB4-205ENST00000478459 A0A1W2PQ45 241 aaPredicted RBP22.32■■□□□ 1.16
EPHB4-205ENST00000478459 A0A1W2PQY0 241 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 SOX1O00570 391 aaPredicted RBP22.32■■□□□ 1.16
EPHB4-205ENST00000478459 C6orf222P0C671 652 aaPredicted RBP22.32■■□□□ 1.16
EPHB4-205ENST00000478459 BEX3Q00994 111 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 KCNA10Q16322 511 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 IFIT1BQ5T764 474 aaKnown RBP22.32■■□□□ 1.16
EPHB4-205ENST00000478459 KATNBL1Q9H079 304 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 CNNM2Q9H8M5 875 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 SENP2Q9HC62 589 aa22.32■■□□□ 1.16
EPHB4-205ENST00000478459 STOX1Q6ZVD7 989 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 SH3RF1Q7Z6J0 888 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 STAG2Q8N3U4 1231 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 CLEC4DQ8WXI8 215 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 LRCH3Q96II8 777 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 PHF24Q9UPV7 400 aa22.31■■□□□ 1.16
EPHB4-205ENST00000478459 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 E7EWF7 191 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 PQBP1O60828 265 aaKnown RBP22.3■■□□□ 1.16
EPHB4-205ENST00000478459 ACLYP53396 1101 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 TLE2Q04725 743 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 TRDNQ13061 729 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-205ENST00000478459 CCDC178Q5BJE1 867 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 GPATCH4Q5T3I0 446 aaKnown RBP22.3■■□□□ 1.16
EPHB4-205ENST00000478459 TBC1D5Q92609 795 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 VTI1AQ96AJ9 217 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 PRKAG2Q9UGJ0 569 aa22.3■■□□□ 1.16
EPHB4-205ENST00000478459 RBM8AQ9Y5S9 174 aaKnown RBP22.3■■□□□ 1.16
EPHB4-205ENST00000478459 U3KPZ7 1027 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-205ENST00000478459 ASB14A6NK59 587 aa22.29■■□□□ 1.16
EPHB4-205ENST00000478459 DUSP11O75319 330 aaKnown RBP22.29■■□□□ 1.16
EPHB4-205ENST00000478459 PARP1P09874 1014 aaKnown RBP22.29■■□□□ 1.16
EPHB4-205ENST00000478459 TNFAIP2Q03169 654 aa22.29■■□□□ 1.16
EPHB4-205ENST00000478459 RNF207Q6ZRF8 634 aa22.29■■□□□ 1.16
EPHB4-205ENST00000478459 ANKS1AQ92625 1134 aa22.29■■□□□ 1.16
EPHB4-205ENST00000478459 LAMA2P24043 3122 aaKnown RBP22.29■■□□□ 1.16
EPHB4-205ENST00000478459 IFIT3O14879 490 aaKnown RBP22.28■■□□□ 1.16
EPHB4-205ENST00000478459 SEC23AQ15436 765 aa22.28■■□□□ 1.16
EPHB4-205ENST00000478459 RALYLQ86SE5 291 aaKnown RBP22.28■■□□□ 1.16
EPHB4-205ENST00000478459 LBHD1Q9BQE6 289 aaPredicted RBP22.28■■□□□ 1.16
EPHB4-205ENST00000478459 STARD7Q9NQZ5 370 aa22.28■■□□□ 1.16
EPHB4-205ENST00000478459 LAMA3Q16787 3333 aa22.28■■□□□ 1.16
EPHB4-205ENST00000478459 BAZ2BQ9UIF8 2168 aaKnown RBP22.28■■□□□ 1.16
EPHB4-205ENST00000478459 SMPD1P17405 629 aa22.27■■□□□ 1.16
EPHB4-205ENST00000478459 ALDH5A1P51649 535 aaPredicted RBP22.27■■□□□ 1.16
EPHB4-205ENST00000478459 RPS6P62753 249 aaKnown RBP22.27■■□□□ 1.16
EPHB4-205ENST00000478459 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
EPHB4-205ENST00000478459 ASPRV1Q53RT3 343 aa22.27■■□□□ 1.16
EPHB4-205ENST00000478459 GNASQ5JWF2 1037 aa22.27■■□□□ 1.16
EPHB4-205ENST00000478459 KLHDC9Q8NEP7 349 aa22.27■■□□□ 1.16
EPHB4-205ENST00000478459 TRIM43BA6NCK2 446 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 DYNC1LI2O43237 492 aaPredicted RBP22.26■■□□□ 1.15
EPHB4-205ENST00000478459 ASGR1P07306 291 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 COL9A3Q14050 684 aaPredicted RBP22.26■■□□□ 1.15
EPHB4-205ENST00000478459 TAPT1Q6NXT6 567 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 MAP4K1Q92918 833 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 BADQ92934 168 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 TRIM43Q96BQ3 446 aaPredicted RBP22.26■■□□□ 1.15
EPHB4-205ENST00000478459 JMJD4Q9H9V9 463 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 GPHNQ9NQX3 736 aaPredicted RBP22.26■■□□□ 1.15
EPHB4-205ENST00000478459 PDLIM7Q9NR12 457 aa22.26■■□□□ 1.15
EPHB4-205ENST00000478459 BMP8BP34820 402 aa22.25■■□□□ 1.15
EPHB4-205ENST00000478459 GJA9P57773 515 aa22.25■■□□□ 1.15
EPHB4-205ENST00000478459 SNX17Q15036 470 aa22.25■■□□□ 1.15
EPHB4-205ENST00000478459 CCSAPQ6IQ19 270 aaPredicted RBP22.25■■□□□ 1.15
EPHB4-205ENST00000478459 CENPQQ7L2Z9 268 aaPredicted RBP22.25■■□□□ 1.15
EPHB4-205ENST00000478459 NCOA7Q8NI08 942 aa22.25■■□□□ 1.15
EPHB4-205ENST00000478459 ESYT1Q9BSJ8 1104 aa22.25■■□□□ 1.15
EPHB4-205ENST00000478459 KLRF2D3W0D1 207 aa22.24■■□□□ 1.15
EPHB4-205ENST00000478459 ANTXR2P58335 489 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms