RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 NRBP1Q9UHY1 535 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 MAD2L2Q9UI95 211 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 ZHX1Q9UKY1 873 aaPredicted RBP26.54■■□□□ 1.84
TRAF4-211ENST00000478021 WDR19Q8NEZ3 1342 aa26.54■■□□□ 1.84
TRAF4-211ENST00000478021 KLRF2D3W0D1 207 aa26.53■■□□□ 1.84
TRAF4-211ENST00000478021 ARMCX2Q7L311 632 aa26.53■■□□□ 1.84
TRAF4-211ENST00000478021 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.53■■□□□ 1.84
TRAF4-211ENST00000478021 DDX49Q9Y6V7 483 aaKnown RBP26.53■■□□□ 1.84
TRAF4-211ENST00000478021 ASTN1O14525 1302 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 MYCNP04198 464 aaPredicted RBP26.52■■□□□ 1.84
TRAF4-211ENST00000478021 MCM5P33992 734 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 BAATQ14032 418 aaPredicted RBP26.52■■□□□ 1.84
TRAF4-211ENST00000478021 GRM4Q14833 912 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 RNF20Q5VTR2 975 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 CCDC144CPQ8IYA2 1237 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 CLEC4DQ8WXI8 215 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 LENG1Q96BZ8 264 aaPredicted RBP26.52■■□□□ 1.84
TRAF4-211ENST00000478021 JMJD4Q9H9V9 463 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 LY9Q9HBG7 655 aa26.52■■□□□ 1.84
TRAF4-211ENST00000478021 LRRC37A2A6NM11 1700 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 PTPDC1A2A3K4 754 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 QRICH1Q2TAL8 776 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 GJC2Q5T442 439 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-211ENST00000478021 SLC30A10Q6XR72 485 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 LRRC2Q9BYS8 371 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 PNMA2Q9UL42 364 aa26.51■■□□□ 1.83
TRAF4-211ENST00000478021 PALM3A6NDB9 673 aaPredicted RBP26.5■■□□□ 1.83
TRAF4-211ENST00000478021 AKR1A1P14550 325 aa26.5■■□□□ 1.83
TRAF4-211ENST00000478021 CATIPQ7Z7H3 387 aa26.5■■□□□ 1.83
TRAF4-211ENST00000478021 NUP133Q8WUM0 1156 aa26.5■■□□□ 1.83
TRAF4-211ENST00000478021 MYL10Q9BUA6 226 aa26.5■■□□□ 1.83
TRAF4-211ENST00000478021 SH2B2O14492 632 aaPredicted RBP26.49■■□□□ 1.83
TRAF4-211ENST00000478021 RARBP10826 455 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 COL6A1P12109 1028 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 CALML3P27482 149 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 TROAPQ12815 778 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 ACVR2BQ13705 512 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 RASEFQ8IZ41 740 aa26.49■■□□□ 1.83
TRAF4-211ENST00000478021 EVI5O60447 810 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 SLC35G1Q2M3R5 365 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 NFXL1Q6ZNB6 911 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 RNF207Q6ZRF8 634 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 ZNF654Q8IZM8 581 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 TMEM87BQ96K49 555 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 XPNPEP3Q9NQH7 507 aa26.48■■□□□ 1.83
TRAF4-211ENST00000478021 ASB14A6NK59 587 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 H0YGN5 161 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 DNM1LO00429 736 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 PGK1P00558 417 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 ADCK5Q3MIX3 580 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 FBXO11Q86XK2 927 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 ARRDC4Q8NCT1 418 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 MTA3Q9BTC8 594 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 SENP6Q9GZR1 1112 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-211ENST00000478021 ABHD16BQ9H3Z7 469 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 FAM184BQ9ULE4 1060 aa26.47■■□□□ 1.83
TRAF4-211ENST00000478021 BAZ2BQ9UIF8 2168 aaKnown RBP26.47■■□□□ 1.83
TRAF4-211ENST00000478021 ABCB11O95342 1321 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 CCDC69A6NI79 296 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 KBTBD13C9JR72 458 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 RPS6P62753 249 aaKnown RBP26.46■■□□□ 1.83
TRAF4-211ENST00000478021 LRRC41Q15345 812 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 HOMER1Q86YM7 354 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 TCEANC2Q96MN5 208 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 NEK1Q96PY6 1258 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 KATNBL1Q9H079 304 aa26.46■■□□□ 1.83
TRAF4-211ENST00000478021 ADCY6O43306 1168 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 RXRAP19793 462 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 ALDH5A1P51649 535 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-211ENST00000478021 CCDC144BQ3MJ40 725 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 EEPD1Q7L9B9 569 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 RAB11FIP4Q86YS3 637 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 C7orf61Q8IZ16 206 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 TBC1D5Q92609 795 aa26.45■■□□□ 1.82
TRAF4-211ENST00000478021 PPP1R11O60927 126 aaPredicted RBP26.44■■□□□ 1.82
TRAF4-211ENST00000478021 DDAH1O94760 285 aa26.44■■□□□ 1.82
TRAF4-211ENST00000478021 FBXO16Q8IX29 292 aaPredicted RBP26.44■■□□□ 1.82
TRAF4-211ENST00000478021 MTMR8Q96EF0 704 aa26.44■■□□□ 1.82
TRAF4-211ENST00000478021 PIGSQ96S52 555 aa26.44■■□□□ 1.82
TRAF4-211ENST00000478021 NR2E3Q9Y5X4 410 aa26.44■■□□□ 1.82
TRAF4-211ENST00000478021 ZBTB5O15062 677 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 CYTH3O43739 400 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 LRRC26Q2I0M4 334 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 TSGA10IPQ3SY00 556 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 TMTC2Q8N394 836 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 CTCFLQ8NI51 663 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-211ENST00000478021 PIBF1Q8WXW3 757 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 AMNQ9BXJ7 453 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 RIOX1Q9H6W3 641 aa26.43■■□□□ 1.82
TRAF4-211ENST00000478021 ADD3Q9UEY8 706 aaKnown RBP26.43■■□□□ 1.82
TRAF4-211ENST00000478021 SYNRGQ9UMZ2 1314 aa26.42■■□□□ 1.82
TRAF4-211ENST00000478021 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-211ENST00000478021 LIFRP42702 1097 aa26.42■■□□□ 1.82
TRAF4-211ENST00000478021 ATN1P54259 1190 aaPredicted RBP26.42■■□□□ 1.82
TRAF4-211ENST00000478021 FERMT2Q96AC1 680 aa26.42■■□□□ 1.82
TRAF4-211ENST00000478021 MRPL11Q9Y3B7 192 aaKnown RBP26.42■■□□□ 1.82
TRAF4-211ENST00000478021 REC8O95072 547 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 HSPA4P34932 840 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 ADCYAP1R1P41586 468 aa26.41■■□□□ 1.82
TRAF4-211ENST00000478021 IRX5P78411 483 aaPredicted RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms