RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PRDM10Q9NQV6 1147 aa18.4■□□□□ 0.54
COPS3-207ENST00000477299 OPLAHO14841 1288 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 COBLO75128 1261 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 SLC25A27O95847 323 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 FLT3LGP49771 235 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 PKN1Q16512 942 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 USP6NLQ92738 828 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 SHISA4Q96DD7 197 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 RRP36Q96EU6 259 aaKnown RBP18.39■□□□□ 0.53
COPS3-207ENST00000477299 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 SRRDQ9UH36 339 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.53
COPS3-207ENST00000477299 RBBP6Q7Z6E9 1792 aaKnown RBP18.39■□□□□ 0.53
COPS3-207ENST00000477299 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 IFNAR1P17181 557 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 CYP2B6P20813 491 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 CCDC83Q8IWF9 413 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 NPLOC4Q8TAT6 608 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
COPS3-207ENST00000477299 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
COPS3-207ENST00000477299 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
COPS3-207ENST00000477299 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 PRPF3O43395 683 aaKnown RBP18.37■□□□□ 0.53
COPS3-207ENST00000477299 JAK2O60674 1132 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 ADORA2AP29274 412 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 CNTN2Q02246 1040 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 GRB14Q14449 540 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 PPP2R5BQ15173 497 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 CCL14Q16627 93 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 NSMFQ6X4W1 530 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 CTU1Q7Z7A3 348 aaKnown RBP18.37■□□□□ 0.53
COPS3-207ENST00000477299 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 MMP19Q99542 508 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 ACAD9Q9H845 621 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
COPS3-207ENST00000477299 PTCH2Q9Y6C5 1203 aa18.37■□□□□ 0.53
COPS3-207ENST00000477299 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 ST18O60284 1047 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 FCER1AP12319 257 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 FDPSP14324 419 aaKnown RBP18.36■□□□□ 0.53
COPS3-207ENST00000477299 BAATQ14032 418 aaPredicted RBP18.36■□□□□ 0.53
COPS3-207ENST00000477299 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 TMX3Q96JJ7 454 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 FLRT1Q9NZU1 646 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 ZNF236Q9UL36 1845 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 PTPN22Q9Y2R2 807 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 IVNS1ABPQ9Y6Y0 642 aa18.36■□□□□ 0.53
COPS3-207ENST00000477299 ABCB11O95342 1321 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 CPLX1O14810 134 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 ELNP15502 786 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 SSRP1Q08945 709 aaKnown RBP18.35■□□□□ 0.53
COPS3-207ENST00000477299 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 SLC30A10Q6XR72 485 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 HEATR3Q7Z4Q2 680 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 NSUN7Q8NE18 718 aaKnown RBP18.35■□□□□ 0.53
COPS3-207ENST00000477299 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 FGD4Q96M96 766 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 NUDT12Q9BQG2 462 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
COPS3-207ENST00000477299 SEC63Q9UGP8 760 aaKnown RBP18.35■□□□□ 0.53
COPS3-207ENST00000477299 ASTN1O14525 1302 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 DNAJC25-GNG10A0A024R161 153 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 STXBP3O00186 592 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 STRNO43815 780 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 TRIM32Q13049 653 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 KCTD2Q14681 263 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 PFKFB3Q16875 520 aaPredicted RBP18.34■□□□□ 0.53
COPS3-207ENST00000477299 ZSCAN31Q96LW9 406 aaPredicted RBP18.34■□□□□ 0.53
COPS3-207ENST00000477299 CYP39A1Q9NYL5 469 aa18.34■□□□□ 0.53
COPS3-207ENST00000477299 PTPDC1A2A3K4 754 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 SOWAHBA6NEL2 793 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 SCG2P13521 617 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 CALML3P27482 149 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
COPS3-207ENST00000477299 COPB2P35606 906 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 RPS6P62753 249 aaKnown RBP18.33■□□□□ 0.52
COPS3-207ENST00000477299 ZNF792Q3KQV3 632 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
COPS3-207ENST00000477299 DPP9Q86TI2 863 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.52
COPS3-207ENST00000477299 FBXO40Q9UH90 709 aa18.33■□□□□ 0.52
COPS3-207ENST00000477299 MRPL11Q9Y3B7 192 aaKnown RBP18.33■□□□□ 0.52
COPS3-207ENST00000477299 CFBP00751 764 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 HOXD10P28358 340 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 RNF207Q6ZRF8 634 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 ABRAQ8N0Z2 381 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 FAM133AQ8N9E0 248 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 SH3TC2Q8TF17 1288 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 MCOLN1Q9GZU1 580 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 VPS54Q9P1Q0 977 aa18.32■□□□□ 0.52
COPS3-207ENST00000477299 ADCY3O60266 1144 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 GNRH1P01148 92 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 RGS2P41220 211 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms