RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NFIBO00712 420 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 PFASO15067 1338 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CYTH3O43739 400 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 SGPL1O95470 568 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CALM1P0DP23 149 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CALM2P0DP24 149 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CALM3P0DP25 149 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 RXRAP19793 462 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 RPS6KB1P23443 525 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 PSMA5P28066 241 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 USH1GQ495M9 461 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 NSMFQ6X4W1 530 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 RAB11FIP4Q86YS3 637 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 FAM133AQ8N9E0 248 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 TRPV1Q8NER1 839 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 U2AF1L4Q8WU68 220 aaKnown RBP18.87■□□□□ 0.61
SRM-204ENST00000475189 SHISA4Q96DD7 197 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 FGD4Q96M96 766 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 TINF2Q9BSI4 451 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 CYP39A1Q9NYL5 469 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 BRPF3Q9ULD4 1205 aa18.87■□□□□ 0.61
SRM-204ENST00000475189 FRMPD3Q5JV73 1810 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 POTEB2H3BUK9 544 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 SEC24BO95487 1268 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 CYBAP13498 195 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 CASTP20810 708 aaKnown RBP18.86■□□□□ 0.61
SRM-204ENST00000475189 KIF5BP33176 963 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 ZNF467Q7Z7K2 595 aaPredicted RBP18.86■□□□□ 0.61
SRM-204ENST00000475189 FBXO11Q86XK2 927 aa18.86■□□□□ 0.61
SRM-204ENST00000475189 ABCB11O95342 1321 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 ZBTB5O15062 677 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 PPP1R11O60927 126 aaPredicted RBP18.85■□□□□ 0.61
SRM-204ENST00000475189 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
SRM-204ENST00000475189 PRAMEF19Q5SWL8 479 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 MAMDC4Q6UXC1 1216 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 SYNE3Q6ZMZ3 975 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 Q6ZUG5 572 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 CCDC144CPQ8IYA2 1237 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 FBXL16Q8N461 479 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 MSL3Q8N5Y2 521 aaKnown RBP18.85■□□□□ 0.61
SRM-204ENST00000475189 FANCBQ8NB91 859 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 PIGSQ96S52 555 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 SPZ1Q9BXG8 430 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 TM6SF1Q9BZW5 370 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 ZSWIM6Q9HCJ5 1215 aa18.85■□□□□ 0.61
SRM-204ENST00000475189 SOWAHBA6NEL2 793 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
SRM-204ENST00000475189 PLEKHA8P1O95397 391 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 GNAQP50148 359 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 FGD1P98174 961 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 RUFY3Q7L099 469 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 MICU3Q86XE3 530 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 SRBD1Q8N5C6 995 aaKnown RBP18.84■□□□□ 0.61
SRM-204ENST00000475189 LZTS2Q9BRK4 669 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 AMNQ9BXJ7 453 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 AGXT2Q9BYV1 514 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
SRM-204ENST00000475189 ASTN1O14525 1302 aa18.83■□□□□ 0.61
SRM-204ENST00000475189 SYNGAP1Q96PV0 1343 aa18.83■□□□□ 0.61
SRM-204ENST00000475189 PNMA6FA0A0J9YX94 578 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 KLF18A0A0U1RQI7 1052 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 ZBTB43O43298 467 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 SNAI1O95863 264 aaPredicted RBP18.83■□□□□ 0.6
SRM-204ENST00000475189 TFRCP02786 760 aaKnown RBP18.83■□□□□ 0.6
SRM-204ENST00000475189 CNGA1P29973 690 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 APOBRQ0VD83 1088 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 LHX8Q68G74 356 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 SLC30A10Q6XR72 485 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 RGS22Q8NE09 1264 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 BRF1Q92994 677 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 NRBP1Q9UHY1 535 aa18.83■□□□□ 0.6
SRM-204ENST00000475189 PTPDC1A2A3K4 754 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 CAPN2P17655 700 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 RNF207Q6ZRF8 634 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 TMTC3Q6ZXV5 915 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 CMTR1Q8N1G2 835 aaKnown RBP18.82■□□□□ 0.6
SRM-204ENST00000475189 PIBF1Q8WXW3 757 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 TBC1D5Q92609 795 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 PURBQ96QR8 312 aaKnown RBP18.82■□□□□ 0.6
SRM-204ENST00000475189 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
SRM-204ENST00000475189 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 CYP46A1Q9Y6A2 500 aa18.82■□□□□ 0.6
SRM-204ENST00000475189 ZNF865P0CJ78 1059 aaPredicted RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 RCAN1P53805 252 aa18.81■□□□□ 0.6
SRM-204ENST00000475189 ANAPC15P60006 121 aa18.81■□□□□ 0.6
SRM-204ENST00000475189 RPS6P62753 249 aaKnown RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
SRM-204ENST00000475189 UPF3BQ9BZI7 483 aaKnown RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 MAF1Q9H063 256 aa18.81■□□□□ 0.6
SRM-204ENST00000475189 RBM28Q9NW13 759 aaKnown RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 DDX20Q9UHI6 824 aaKnown RBP18.81■□□□□ 0.6
SRM-204ENST00000475189 OGDHLQ9ULD0 1010 aa18.81■□□□□ 0.6
SRM-204ENST00000475189 ASB14A6NK59 587 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms