RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 ZNF473Q8WTR7 871 aaKnown RBP16.19■□□□□ 0.18
SAMM50-203ENST00000474323 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 LRRC1Q9BTT6 524 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 UBE2Q2LH0YL09 131 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
SAMM50-203ENST00000474323 MEA1Q16626 185 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 TSEN2Q8NCE0 465 aaKnown RBP16.19■□□□□ 0.18
SAMM50-203ENST00000474323 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 DENND2AQ9ULE3 1009 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 SNX12Q9UMY4 172 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 ZPR1O75312 459 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 PPP1R37O75864 691 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 TRIM37O94972 964 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 CASP1P29466 404 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 PAK1Q13153 545 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 RNF187Q5TA31 235 aaPredicted RBP16.18■□□□□ 0.18
SAMM50-203ENST00000474323 LRCH2Q5VUJ6 765 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 CCDC170Q8IYT3 715 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 HDAC7Q8WUI4 952 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 EPSTI1Q96J88 318 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 ACTR5Q9H9F9 607 aaPredicted RBP16.18■□□□□ 0.18
SAMM50-203ENST00000474323 ERFEQ4G0M1 354 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 RRAGBQ5VZM2 374 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 SPATA4Q8NEY3 305 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 ARHGEF1Q92888 912 aaKnown RBP16.18■□□□□ 0.18
SAMM50-203ENST00000474323 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
SAMM50-203ENST00000474323 ZIM3Q96PE6 472 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 LACRTQ9GZZ8 138 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 STIM2Q9P246 746 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 TFR2Q9UP52 801 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 SLC12A7Q9Y666 1083 aa16.18■□□□□ 0.18
SAMM50-203ENST00000474323 SCN7AQ01118 1682 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 B4E1Z4 1266 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 CALRP27797 417 aaKnown RBP16.17■□□□□ 0.18
SAMM50-203ENST00000474323 ATP1A2P50993 1020 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 PTGISQ16647 500 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 FAM196AQ6ZSG2 479 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 C1orf131Q8NDD1 294 aaKnown RBP16.17■□□□□ 0.18
SAMM50-203ENST00000474323 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
SAMM50-203ENST00000474323 CCT8L2Q96SF2 557 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 TSGA10Q9BZW7 698 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 SLC40A1Q9NP59 571 aa16.17■□□□□ 0.18
SAMM50-203ENST00000474323 GOLGA6L7A0A1B0GV03 622 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 H7C1D1 291 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 NR5A1Q13285 461 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
SAMM50-203ENST00000474323 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 C6orf89Q6UWU4 347 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 FAXDC2Q96IV6 333 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 ABCC12Q96J65 1359 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 FAM107AO95990 144 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 SNCBQ16143 134 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 FMNL3Q8IVF7 1028 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 IQCKQ8N0W5 287 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 SH2D3CQ8N5H7 860 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 MYCBPAPQ8TBZ2 947 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 SYMPKQ92797 1274 aaKnown RBP16.16■□□□□ 0.18
SAMM50-203ENST00000474323 MYL10Q9BUA6 226 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 NID2Q14112 1375 aa16.16■□□□□ 0.18
SAMM50-203ENST00000474323 RCCD1A6NED2 376 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 LGALS16A8MUM7 142 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 KIF3CO14782 793 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 DEXIO95424 95 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 VAV2P52735 878 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 GLE1Q53GS7 698 aaKnown RBP16.15■□□□□ 0.18
SAMM50-203ENST00000474323 CD302Q8IX05 232 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 NELFBQ8WX92 580 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 HINFPQ9BQA5 517 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 ZNHIT6Q9NWK9 470 aaKnown RBP16.15■□□□□ 0.18
SAMM50-203ENST00000474323 LAMB2P55268 1798 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 PDE8BO95263 885 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 BMP15O95972 392 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 NR1D1P20393 614 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 MDH1P40925 334 aaKnown RBP16.15■□□□□ 0.18
SAMM50-203ENST00000474323 GUCY1A3Q02108 690 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 IFT88Q13099 833 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 KCTD16Q68DU8 428 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 PARP9Q8IXQ6 854 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 VGLL2Q8N8G2 317 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 SETDB2Q96T68 719 aa16.15■□□□□ 0.18
SAMM50-203ENST00000474323 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■■■□□ 15.4
SAMM50-203ENST00000474323 COBLO75128 1261 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms