RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 HOXD11P31277 338 aaPredicted RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 ATN1P54259 1190 aaPredicted RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 CCDC144BQ3MJ40 725 aa13.07□□□□□ -0.32
CKS1B-206ENST00000474215 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
CKS1B-206ENST00000474215 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
CKS1B-206ENST00000474215 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
CKS1B-206ENST00000474215 PLXNA1Q9UIW2 1896 aa13.07□□□□□ -0.32
CKS1B-206ENST00000474215 CEP290O15078 2479 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 ERICH2A1L162 156 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 PTPDC1A2A3K4 754 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 ADAMTS4O75173 837 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 SYN1P17600 705 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 STOX1Q6ZVD7 989 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 LENG1Q96BZ8 264 aaPredicted RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 PURBQ96QR8 312 aaKnown RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 PRO3102Q9H379 93 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
CKS1B-206ENST00000474215 PHF24Q9UPV7 400 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 ASTN1O14525 1302 aa13.06□□□□□ -0.32
CKS1B-206ENST00000474215 KLRF2D3W0D1 207 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 DHX16O60231 1041 aaKnown RBP13.05□□□□□ -0.32
CKS1B-206ENST00000474215 CALML3P27482 149 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
CKS1B-206ENST00000474215 USH1GQ495M9 461 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 STAG2Q8N3U4 1231 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 ANO2Q9NQ90 1003 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
CKS1B-206ENST00000474215 FRMPD3Q5JV73 1810 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 LOC102724159A0A0B4J2E5 919 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 PALM3A6NDB9 673 aaPredicted RBP13.04□□□□□ -0.32
CKS1B-206ENST00000474215 SLC27A2O14975 620 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 ADCY6O43306 1168 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 SLC34A2O95436 690 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 ACLYP53396 1101 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 ANTXR2P58335 489 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 RTP1P59025 263 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
CKS1B-206ENST00000474215 TNFAIP2Q03169 654 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 WTAPQ15007 396 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 NECTIN1Q15223 517 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 PWP2Q15269 919 aaKnown RBP13.04□□□□□ -0.32
CKS1B-206ENST00000474215 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 C1orf53Q5VUE5 145 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 IQSEC1Q6DN90 963 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 MB21D2Q8IYB1 491 aaPredicted RBP13.04□□□□□ -0.32
CKS1B-206ENST00000474215 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 GDF15Q99988 308 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 MAF1Q9H063 256 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
CKS1B-206ENST00000474215 ABCB11O95342 1321 aa13.04□□□□□ -0.32
CKS1B-206ENST00000474215 A0A1W2PQ45 241 aaPredicted RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 A0A1W2PQY0 241 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 NEFLP07196 543 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 C6orf222P0C671 652 aaPredicted RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 BMP8BP34820 402 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 ALDH5A1P51649 535 aaPredicted RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 GJA9P57773 515 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 TROAPQ12815 778 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 GRM4Q14833 912 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 SNX17Q15036 470 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 KCNA10Q16322 511 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 GNASQ5JWF2 1037 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 CCSAPQ6IQ19 270 aaPredicted RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 TAPT1Q6NXT6 567 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 SLC30A10Q6XR72 485 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 NOL8Q76FK4 1167 aaKnown RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 EEPD1Q7L9B9 569 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 CATIPQ7Z7H3 387 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 PCSK9Q8NBP7 692 aaKnown RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 MTA3Q9BTC8 594 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 UPF3AQ9H1J1 476 aaKnown RBP13.03□□□□□ -0.32
CKS1B-206ENST00000474215 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 PDGFCQ9NRA1 345 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
CKS1B-206ENST00000474215 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms