RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 PCDH10Q9P2E7 1040 aa20.99■□□□□ 0.95
UPF3A-203ENST00000474056 DDX49Q9Y6V7 483 aaKnown RBP20.99■□□□□ 0.95
UPF3A-203ENST00000474056 WDR19Q8NEZ3 1342 aa20.99■□□□□ 0.95
UPF3A-203ENST00000474056 DNAH12Q6ZR08 3092 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 ADCY6O43306 1168 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 NCOA7Q8NI08 942 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 PURBQ96QR8 312 aaKnown RBP20.98■□□□□ 0.95
UPF3A-203ENST00000474056 PRO3102Q9H379 93 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
UPF3A-203ENST00000474056 FAM184BQ9ULE4 1060 aa20.98■□□□□ 0.95
UPF3A-203ENST00000474056 ADAMTS4O75173 837 aa20.97■□□□□ 0.95
UPF3A-203ENST00000474056 PARP1P09874 1014 aaKnown RBP20.97■□□□□ 0.95
UPF3A-203ENST00000474056 BAATQ14032 418 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-203ENST00000474056 CDC37Q16543 378 aaPredicted RBP20.97■□□□□ 0.95
UPF3A-203ENST00000474056 CHST3Q7LGC8 479 aa20.97■□□□□ 0.95
UPF3A-203ENST00000474056 RALYLQ86SE5 291 aaKnown RBP20.97■□□□□ 0.95
UPF3A-203ENST00000474056 ADGRF4Q8IZF3 695 aa20.97■□□□□ 0.95
UPF3A-203ENST00000474056 CLEC4DQ8WXI8 215 aa20.97■□□□□ 0.95
UPF3A-203ENST00000474056 SYNRGQ9UMZ2 1314 aa20.97■□□□□ 0.95
UPF3A-203ENST00000474056 PTPDC1A2A3K4 754 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 ASB14A6NK59 587 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 ADCYAP1R1P41586 468 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 CCDC144BQ3MJ40 725 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 USH1GQ495M9 461 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 SLC30A10Q6XR72 485 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 KIAA1211Q6ZU35 1233 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 RNF180Q86T96 592 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 MB21D2Q8IYB1 491 aaPredicted RBP20.96■□□□□ 0.95
UPF3A-203ENST00000474056 STAG2Q8N3U4 1231 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 FERMT2Q96AC1 680 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 CCDC136Q96JN2 1154 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 SENP2Q9HC62 589 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 LTBP2Q14767 1821 aa20.96■□□□□ 0.95
UPF3A-203ENST00000474056 RANBP2P49792 3224 aaKnown RBP20.95■□□□□ 0.94
UPF3A-203ENST00000474056 IFIT3O14879 490 aaKnown RBP20.95■□□□□ 0.94
UPF3A-203ENST00000474056 ANTXR2P58335 489 aa20.95■□□□□ 0.94
UPF3A-203ENST00000474056 RTP1P59025 263 aa20.95■□□□□ 0.94
UPF3A-203ENST00000474056 PNMA2Q9UL42 364 aa20.95■□□□□ 0.94
UPF3A-203ENST00000474056 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-203ENST00000474056 MYADML2A6NDP7 307 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 DUSP11O75319 330 aaKnown RBP20.94■□□□□ 0.94
UPF3A-203ENST00000474056 SLC34A2O95436 690 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 IRX5P78411 483 aaPredicted RBP20.94■□□□□ 0.94
UPF3A-203ENST00000474056 WTAPQ15007 396 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 SLC39A5Q6ZMH5 540 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 ANO2Q9NQ90 1003 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 MAD2L2Q9UI95 211 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 PHF24Q9UPV7 400 aa20.94■□□□□ 0.94
UPF3A-203ENST00000474056 ERICH2A1L162 156 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 DHX16O60231 1041 aaKnown RBP20.93■□□□□ 0.94
UPF3A-203ENST00000474056 CALML3P27482 149 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 ALDH5A1P51649 535 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-203ENST00000474056 RPS6P62753 249 aaKnown RBP20.93■□□□□ 0.94
UPF3A-203ENST00000474056 QRICH1Q2TAL8 776 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 RNF207Q6ZRF8 634 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 EEPD1Q7L9B9 569 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 FBXO16Q8IX29 292 aaPredicted RBP20.93■□□□□ 0.94
UPF3A-203ENST00000474056 KLHDC9Q8NEP7 349 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 GDF15Q99988 308 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 VAT1LQ9HCJ6 419 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 ATP11BQ9Y2G3 1177 aa20.93■□□□□ 0.94
UPF3A-203ENST00000474056 SLC27A2O14975 620 aa20.92■□□□□ 0.94
UPF3A-203ENST00000474056 COL9A3Q14050 684 aaPredicted RBP20.92■□□□□ 0.94
UPF3A-203ENST00000474056 SNX17Q15036 470 aa20.92■□□□□ 0.94
UPF3A-203ENST00000474056 MORC4Q8TE76 937 aa20.92■□□□□ 0.94
UPF3A-203ENST00000474056 KIAA1217Q5T5P2 1943 aa20.92■□□□□ 0.94
UPF3A-203ENST00000474056 A0A1W2PQ45 241 aaPredicted RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 A0A1W2PQY0 241 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 PALM3A6NDB9 673 aaPredicted RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 KLRF2D3W0D1 207 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 ABCB11O95342 1321 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 C6orf222P0C671 652 aaPredicted RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 MAGEA10P43363 369 aaPredicted RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 FXR1P51114 621 aaKnown RBP eCLIP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 GRM4Q14833 912 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 TRIM60Q495X7 471 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 TMEM67Q5HYA8 995 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 CREB3L3Q68CJ9 461 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 CCSAPQ6IQ19 270 aaPredicted RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 IGDCC4Q8TDY8 1250 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 UPF3AQ9H1J1 476 aaKnown RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 PDGFCQ9NRA1 345 aa20.91■□□□□ 0.94
UPF3A-203ENST00000474056 ADD3Q9UEY8 706 aaKnown RBP20.91■□□□□ 0.94
UPF3A-203ENST00000474056 PTGS1P23219 599 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 CST5P28325 142 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-203ENST00000474056 GJA9P57773 515 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 TNFAIP2Q03169 654 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 KCNA10Q16322 511 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 SLC35G1Q2M3R5 365 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 TAPT1Q6NXT6 567 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 FBXO11Q86XK2 927 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 TBC1D5Q92609 795 aa20.9■□□□□ 0.94
UPF3A-203ENST00000474056 TSEN34Q9BSV6 310 aaKnown RBP20.9■□□□□ 0.94
UPF3A-203ENST00000474056 GPHNQ9NQX3 736 aaPredicted RBP20.9■□□□□ 0.94
UPF3A-203ENST00000474056 CDC45O75419 566 aa20.89■□□□□ 0.93
UPF3A-203ENST00000474056 ACLYP53396 1101 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms