RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CTAGE5O15320 804 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 CD4P01730 458 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 CHGBP05060 677 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 C6orf222P0C671 652 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 IGFBP4P22692 258 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 ADD2P35612 726 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 GJA9P57773 515 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 DSG2Q14126 1118 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 RAB30Q15771 203 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC85BQ15834 202 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC144BQ3MJ40 725 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 ZNF365Q70YC5 407 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 TMEM199Q8N511 208 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 PCSK9Q8NBP7 692 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 RHPN1Q8TCX5 695 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 HERVK_113Q902F9 699 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 NECAB3Q96P71 396 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 SLF1Q9BQI6 1058 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 PPP1R12CQ9BZL4 782 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 KATNBL1Q9H079 304 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 NKX2-4Q9H2Z4 354 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 ABHD16BQ9H3Z7 469 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 IL23AQ9NPF7 189 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 MSRAQ9UJ68 235 aa6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 YBX2Q9Y2T7 364 aaKnown RBP6.17□□□□□ -1.42
SNRNP40-204ENST00000474025 MUC6Q6W4X9 2439 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 VPS13AQ96RL7 3174 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 PRRC2BQ5JSZ5 2229 aaKnown RBP6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 RAD21O60216 631 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 NDUFB10O96000 172 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 CYP2C18P33260 490 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 NKX3-2P78367 333 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 HSP90AB4PQ58FF6 505 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 GNASQ5JWF2 1037 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 CTR9Q6PD62 1173 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 ARMCX2Q7L311 632 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 AMOTL1Q8IY63 956 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 PRPF38AQ8NAV1 312 aaKnown RBP6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 SLC43A3Q8NBI5 491 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 VTI1AQ96AJ9 217 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 KIF1BPQ96EK5 621 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 DDX11Q96FC9 970 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 SNX27Q96L92 541 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 HIPK3Q9H422 1215 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 SLC28A3Q9HAS3 691 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 SPC25Q9HBM1 224 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 SLC38A10Q9HBR0 1119 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 PAG1Q9NWQ8 432 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 MCM3APO60318 1980 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 ASTN1O14525 1302 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 UMODL1Q5DID0 1318 aa6.16□□□□□ -1.42
SNRNP40-204ENST00000474025 GBF1Q92538 1859 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 MYO15AQ9UKN7 3530 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 WDR87Q6ZQQ6 2873 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 F5H6K3 240 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 FGBP02675 491 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 IFIT2P09913 472 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 BMP1P13497 986 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 MYOGP15173 224 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 RASA1P20936 1047 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 BEX3Q00994 111 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 TFF2Q03403 129 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 KLRC3Q07444 240 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 UBE3CQ15386 1083 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 TMEM31Q5JXX7 168 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 PPP2R2DQ66LE6 453 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 CXCL17Q6UXB2 119 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 OTOP2Q7RTS6 562 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 CCDC144CPQ8IYA2 1237 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 CPXCR1Q8N123 301 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 ANKRD35Q8N283 1001 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 CLASRPQ8N2M8 674 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 DDRGK1Q96HY6 314 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 WNT8AQ9H1J5 351 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 MTIF3Q9H2K0 278 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 RAVER2Q9HCJ3 691 aaKnown RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 NYAP2Q9P242 653 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 ARPP21Q9UBL0 812 aaPredicted RBP6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 SLC4A4Q9Y6R1 1079 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 LRRC37A2A6NM11 1700 aa6.15□□□□□ -1.42
SNRNP40-204ENST00000474025 GRIN2DO15399 1336 aa6.15□□□□□ -1.43
SNRNP40-204ENST00000474025 DMDP11532 3685 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 IGKV6D-41A0A0C4DH26 115 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 ARHGAP33O14559 1287 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 B4GALT4O60513 344 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 ZBED4O75132 1171 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 CABYRO75952 493 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 ATP5JP18859 108 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 PTGS1P23219 599 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 SLC4A3P48751 1232 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 KCNQ1P51787 676 aa6.14□□□□□ -1.43
SNRNP40-204ENST00000474025 RABGGTBP53611 331 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms