RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SNAP25P60880 206 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 MDM2Q00987 491 aaPredicted RBP21.14■□□□□ 0.97
SNX4-204ENST00000473417 CCDC178Q5BJE1 867 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 CCDC174Q6PII3 467 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 DGKHQ86XP1 1220 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 FERMT2Q96AC1 680 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 LRCH3Q96II8 777 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 UBAC1Q9BSL1 405 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 RANBP17Q9H2T7 1088 aaKnown RBP21.14■□□□□ 0.97
SNX4-204ENST00000473417 ABHD16BQ9H3Z7 469 aa21.14■□□□□ 0.97
SNX4-204ENST00000473417 TNKSO95271 1327 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 POTEB2H3BUK9 544 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 ALAS1P13196 640 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 CNTN2Q02246 1040 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 ACVR2BQ13705 512 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 LRIT3Q3SXY7 679 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 TRIM60Q495X7 471 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 RNF20Q5VTR2 975 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 TTBK2Q6IQ55 1244 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 GPR153Q6NV75 609 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 TRERF1Q96PN7 1200 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 KATNBL1Q9H079 304 aa21.13■□□□□ 0.97
SNX4-204ENST00000473417 A0A1W2PQ45 241 aaPredicted RBP21.12■□□□□ 0.97
SNX4-204ENST00000473417 A0A1W2PQY0 241 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 ADCY6O43306 1168 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 DUSP11O75319 330 aaKnown RBP21.12■□□□□ 0.97
SNX4-204ENST00000473417 ICAM1P05362 532 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 PDHBP11177 359 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 SLC16A2P36021 539 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 MUM1L1Q5H9M0 696 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 CHST3Q7LGC8 479 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 CCDC144CPQ8IYA2 1237 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 ENAHQ8N8S7 591 aaPredicted RBP21.12■□□□□ 0.97
SNX4-204ENST00000473417 CCPG1Q9ULG6 757 aa21.12■□□□□ 0.97
SNX4-204ENST00000473417 ASTN1O14525 1302 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 FRMPD2Q68DX3 1309 aaPredicted RBP21.11■□□□□ 0.97
SNX4-204ENST00000473417 SOWAHBA6NEL2 793 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 REC8O95072 547 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 SNHG28P0DPA3 235 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 CCDC144BQ3MJ40 725 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 SYDE2Q5VT97 1194 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 KLHDC9Q8NEP7 349 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 ANKS1AQ92625 1134 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 LBHD1Q9BQE6 289 aaPredicted RBP21.11■□□□□ 0.97
SNX4-204ENST00000473417 TSEN34Q9BSV6 310 aaKnown RBP21.11■□□□□ 0.97
SNX4-204ENST00000473417 PDLIM7Q9NR12 457 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 CYP39A1Q9NYL5 469 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 PRKAG2Q9UGJ0 569 aa21.11■□□□□ 0.97
SNX4-204ENST00000473417 CST5P28325 142 aaPredicted RBP21.1■□□□□ 0.97
SNX4-204ENST00000473417 MB21D2Q8IYB1 491 aaPredicted RBP21.1■□□□□ 0.97
SNX4-204ENST00000473417 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
SNX4-204ENST00000473417 MOXD2PA6NHM9 499 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 IFIT3O14879 490 aaKnown RBP21.09■□□□□ 0.97
SNX4-204ENST00000473417 ACLYP53396 1101 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 ANTXR2P58335 489 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 SEC23AQ15436 765 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 IFIT1BQ5T764 474 aaKnown RBP21.09■□□□□ 0.97
SNX4-204ENST00000473417 CCSAPQ6IQ19 270 aaPredicted RBP21.09■□□□□ 0.97
SNX4-204ENST00000473417 RASEFQ8IZ41 740 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 UPF3AQ9H1J1 476 aaKnown RBP21.09■□□□□ 0.97
SNX4-204ENST00000473417 GPCPD1Q9NPB8 672 aa21.09■□□□□ 0.97
SNX4-204ENST00000473417 MYADML2A6NDP7 307 aa21.08■□□□□ 0.97
SNX4-204ENST00000473417 ASB14A6NK59 587 aa21.08■□□□□ 0.97
SNX4-204ENST00000473417 TLE2Q04725 743 aa21.08■□□□□ 0.97
SNX4-204ENST00000473417 COL9A3Q14050 684 aaPredicted RBP21.08■□□□□ 0.97
SNX4-204ENST00000473417 PRDM5Q9NQX1 630 aaPredicted RBP21.08■□□□□ 0.97
SNX4-204ENST00000473417 COL6A3P12111 3177 aa21.08■□□□□ 0.96
SNX4-204ENST00000473417 ERICH2A1L162 156 aa21.07■□□□□ 0.96
SNX4-204ENST00000473417 HSPA4P34932 840 aa21.07■□□□□ 0.96
SNX4-204ENST00000473417 GJA9P57773 515 aa21.07■□□□□ 0.96
SNX4-204ENST00000473417 IRX5P78411 483 aaPredicted RBP21.07■□□□□ 0.96
SNX4-204ENST00000473417 SART3Q15020 963 aaKnown RBP21.07■□□□□ 0.96
SNX4-204ENST00000473417 KCNA10Q16322 511 aa21.07■□□□□ 0.96
SNX4-204ENST00000473417 PRC1O43663 620 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 C6orf222P0C671 652 aaPredicted RBP21.06■□□□□ 0.96
SNX4-204ENST00000473417 MCM5P33992 734 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 NKX3-2P78367 333 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 WTAPQ15007 396 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 TMEM67Q5HYA8 995 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 NSMFQ6X4W1 530 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 SENP2Q9HC62 589 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 STARD7Q9NQZ5 370 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 GTF3C3Q9Y5Q9 886 aa21.06■□□□□ 0.96
SNX4-204ENST00000473417 WDR19Q8NEZ3 1342 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 TRIM43BA6NCK2 446 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 NFIBO00712 420 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 CTAGE5O15320 804 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 CLTBP09497 229 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 GOLGA8HP0CJ92 632 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 ADCK5Q3MIX3 580 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 TSGA10IPQ3SY00 556 aa21.05■□□□□ 0.96
SNX4-204ENST00000473417 GPATCH4Q5T3I0 446 aaKnown RBP21.05■□□□□ 0.96
SNX4-204ENST00000473417 ANKRD33Q7Z3H0 272 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms