RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 CCDC42Q96M95 316 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 ERGIC2Q96RQ1 377 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 CCSER1Q9C0I3 900 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 DEF6Q9H4E7 631 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 CICQ96RK0 1608 aaPredicted RBP16.57■□□□□ 0.24
FXR1-209ENST00000472339 CCNE1P24864 410 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 PPP1R2P41236 205 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 EPHB4P54760 987 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 CYP27A1Q02318 531 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 ALS2CLQ60I27 953 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 EMBQ6PCB8 327 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
FXR1-209ENST00000472339 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
FXR1-209ENST00000472339 P2RX5Q93086 422 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 CNOT6LQ96LI5 555 aaKnown RBP16.57■□□□□ 0.24
FXR1-209ENST00000472339 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
FXR1-209ENST00000472339 MAGEF1Q9HAY2 307 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 SH3GLB2Q9NR46 395 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.57■□□□□ 0.24
FXR1-209ENST00000472339 FAM169AQ9Y6X4 670 aa16.57■□□□□ 0.24
FXR1-209ENST00000472339 GRIN2DO15399 1336 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 SLIT2O94813 1529 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 ITGB4P16144 1822 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 ADAMTS3O15072 1205 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 ORC4O43929 436 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 ERLIN2O94905 339 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 TNFRSF8P28908 595 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 HNRNPH3P31942 346 aaKnown RBP16.56■□□□□ 0.24
FXR1-209ENST00000472339 UBA7P41226 1012 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 KLK7P49862 253 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 CCDC96Q2M329 555 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 SPATA4Q8NEY3 305 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 BCAS4Q8TDM0 211 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
FXR1-209ENST00000472339 LRRC1Q9BTT6 524 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 SH2D4AQ9H788 454 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
FXR1-209ENST00000472339 ZNF263O14978 683 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 TCP1P17987 556 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 GNGT1P63211 74 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 SKOR1P84550 965 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 SKIDA1Q1XH10 827 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 FKBP15Q5T1M5 1219 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 DMGDHQ9UI17 866 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 KIF5BP33176 963 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 HDAC7Q8WUI4 952 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 CAVIN3Q969G5 261 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 IFIH1Q9BYX4 1025 aaKnown RBP16.55■□□□□ 0.24
FXR1-209ENST00000472339 HYOU1Q9Y4L1 999 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 FAM205AQ6ZU69 1335 aa16.55■□□□□ 0.24
FXR1-209ENST00000472339 LCA5LO95447 670 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
FXR1-209ENST00000472339 CHRNDQ07001 517 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 EZH2Q15910 746 aaKnown RBP16.54■□□□□ 0.24
FXR1-209ENST00000472339 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 ALS2CR12Q96Q35 445 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 OSBPL9Q96SU4 736 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 RUFY1Q96T51 708 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 PLAGL2Q9UPG8 496 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 CAPN6Q9Y6Q1 641 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 PP2D1A8MPX8 630 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 LAD1O00515 517 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 HSF2BPO75031 334 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 NNTQ13423 1086 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 STIM2Q9P246 746 aa16.54■□□□□ 0.24
FXR1-209ENST00000472339 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
FXR1-209ENST00000472339 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
FXR1-209ENST00000472339 PRPHP41219 470 aa16.53■□□□□ 0.24
FXR1-209ENST00000472339 GLE1Q53GS7 698 aaKnown RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 SWT1Q5T5J6 900 aaKnown RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 CCDC181Q5TID7 509 aa16.53■□□□□ 0.24
FXR1-209ENST00000472339 TMED8Q6PL24 325 aaPredicted RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 KRT26Q7Z3Y9 468 aa16.53■□□□□ 0.24
FXR1-209ENST00000472339 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 DRC1Q96MC2 740 aa16.53■□□□□ 0.24
FXR1-209ENST00000472339 GEMIN8Q9NWZ8 242 aaKnown RBP16.53■□□□□ 0.24
FXR1-209ENST00000472339 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
FXR1-209ENST00000472339 USP17L21D6R901 530 aa16.52■□□□□ 0.24
FXR1-209ENST00000472339 M0R2N6 131 aa16.52■□□□□ 0.24
FXR1-209ENST00000472339 LIG3P49916 1009 aa16.52■□□□□ 0.24
FXR1-209ENST00000472339 PDE4DQ08499 809 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms