RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PPP4R2Q9NY27 417 aa17.65■□□□□ 0.42
CALD1-215ENST00000472096 DIS3Q9Y2L1 958 aaKnown RBP17.65■□□□□ 0.42
CALD1-215ENST00000472096 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
CALD1-215ENST00000472096 TFRCP02786 760 aaKnown RBP17.64■□□□□ 0.41
CALD1-215ENST00000472096 TKFCQ3LXA3 575 aa17.64■□□□□ 0.41
CALD1-215ENST00000472096 ASTLQ6HA08 431 aaPredicted RBP17.64■□□□□ 0.41
CALD1-215ENST00000472096 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
CALD1-215ENST00000472096 MB21D2Q8IYB1 491 aaPredicted RBP17.64■□□□□ 0.41
CALD1-215ENST00000472096 TRPV1Q8NER1 839 aa17.64■□□□□ 0.41
CALD1-215ENST00000472096 ICAM1P05362 532 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 GOLGA8HP0CJ92 632 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 ALAS1P13196 640 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 TAL1P17542 331 aaPredicted RBP17.63■□□□□ 0.41
CALD1-215ENST00000472096 ASPRV1Q53RT3 343 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 DDX11Q96FC9 970 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 OGDHLQ9ULD0 1010 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
CALD1-215ENST00000472096 SLC27A2O14975 620 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 ANTXR2P58335 489 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 NECTIN1Q15223 517 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 LHX8Q68G74 356 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 ANKRD35Q8N283 1001 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 ANKLE1Q8NAG6 615 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 TRERF1Q96PN7 1200 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 CPVLQ9H3G5 476 aa17.62■□□□□ 0.41
CALD1-215ENST00000472096 A1CFQ9NQ94 594 aaKnown RBP17.62■□□□□ 0.41
CALD1-215ENST00000472096 BAZ2BQ9UIF8 2168 aaKnown RBP17.62■□□□□ 0.41
CALD1-215ENST00000472096 IFIT3O14879 490 aaKnown RBP17.61■□□□□ 0.41
CALD1-215ENST00000472096 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
CALD1-215ENST00000472096 CNGA1P29973 690 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 MUM1L1Q5H9M0 696 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 CHST3Q7LGC8 479 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
CALD1-215ENST00000472096 FGD4Q96M96 766 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 TINF2Q9BSI4 451 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 DDX20Q9UHI6 824 aaKnown RBP17.61■□□□□ 0.41
CALD1-215ENST00000472096 PFASO15067 1338 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 WDR19Q8NEZ3 1342 aa17.61■□□□□ 0.41
CALD1-215ENST00000472096 ERICH2A1L162 156 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 MSCO60682 206 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 WTAPQ15007 396 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 SART3Q15020 963 aaKnown RBP17.6■□□□□ 0.41
CALD1-215ENST00000472096 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
CALD1-215ENST00000472096 UBA5Q9GZZ9 404 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 NRBP1Q9UHY1 535 aa17.6■□□□□ 0.41
CALD1-215ENST00000472096 SYNGAP1Q96PV0 1343 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 SEPT4O43236 478 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
CALD1-215ENST00000472096 PRAMEF19Q5SWL8 479 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 MAMDC4Q6UXC1 1216 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 FAM133AQ8N9E0 248 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 PAWRQ96IZ0 340 aaKnown RBP17.59■□□□□ 0.41
CALD1-215ENST00000472096 DCBLD2Q96PD2 775 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
CALD1-215ENST00000472096 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
CALD1-215ENST00000472096 TMEM67Q5HYA8 995 aa17.58■□□□□ 0.4
CALD1-215ENST00000472096 PRPF38BQ5VTL8 546 aaKnown RBP17.58■□□□□ 0.4
CALD1-215ENST00000472096 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
CALD1-215ENST00000472096 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
CALD1-215ENST00000472096 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
CALD1-215ENST00000472096 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
CALD1-215ENST00000472096 POTEB2H3BUK9 544 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 NFIBO00712 420 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 PRC1O43663 620 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 ZNF865P0CJ78 1059 aaPredicted RBP17.57■□□□□ 0.4
CALD1-215ENST00000472096 CNTN2Q02246 1040 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 GRM4Q14833 912 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 NECAB2Q7Z6G3 386 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 ADGRF4Q8IZF3 695 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 MTA3Q9BTC8 594 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 HTATIP2Q9BUP3 242 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 LY9Q9HBG7 655 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 MAD2L2Q9UI95 211 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 CNPY2Q9Y2B0 182 aa17.57■□□□□ 0.4
CALD1-215ENST00000472096 PALM3A6NDB9 673 aaPredicted RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 MCM5P33992 734 aa17.56■□□□□ 0.4
CALD1-215ENST00000472096 ANO1Q5XXA6 986 aa17.56■□□□□ 0.4
CALD1-215ENST00000472096 ARMCX2Q7L311 632 aa17.56■□□□□ 0.4
CALD1-215ENST00000472096 SP7Q8TDD2 431 aaPredicted RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 CLEC4DQ8WXI8 215 aa17.56■□□□□ 0.4
CALD1-215ENST00000472096 JMJD4Q9H9V9 463 aa17.56■□□□□ 0.4
CALD1-215ENST00000472096 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.56■□□□□ 0.4
CALD1-215ENST00000472096 ASTN1O14525 1302 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 CEP290O15078 2479 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 SOWAHBA6NEL2 793 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 KLRF2D3W0D1 207 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
CALD1-215ENST00000472096 TROAPQ12815 778 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 USH1GQ495M9 461 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 TMEM87BQ96K49 555 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 C11orf49Q9H6J7 331 aa17.55■□□□□ 0.4
CALD1-215ENST00000472096 DDAH1O94760 285 aa17.54■□□□□ 0.4
CALD1-215ENST00000472096 COL6A1P12109 1028 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms