RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 R3HDMLQ9H3Y0 253 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 CHMP5Q9NZZ3 219 aa22.08■■□□□ 1.13
PSPC1-203ENST00000471658 BTBD18B2RXH4 712 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 KIF28PB7ZC32 967 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 ATP2A1O14983 1001 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 ZSCAN22P10073 491 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-203ENST00000471658 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-203ENST00000471658 MUM1L1Q5H9M0 696 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 DIS3L2Q8IYB7 885 aaKnown RBP22.07■■□□□ 1.12
PSPC1-203ENST00000471658 CCDC148Q8NFR7 591 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 CLEC4DQ8WXI8 215 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 PARK7Q99497 189 aaKnown RBP22.07■■□□□ 1.12
PSPC1-203ENST00000471658 ZMYND12Q9H0C1 365 aa22.07■■□□□ 1.12
PSPC1-203ENST00000471658 CIZ1Q9ULV3 898 aaPredicted RBP22.07■■□□□ 1.12
PSPC1-203ENST00000471658 OAZ1P54368 228 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 NR5A1Q13285 461 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 RASGRP4Q8TDF6 673 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 CCDC12Q8WUD4 166 aaPredicted RBP22.06■■□□□ 1.12
PSPC1-203ENST00000471658 TEX13BQ9BXU2 312 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 SPATC1LQ9H0A9 340 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 RABGAP1Q9Y3P9 1069 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 ABCB11O95342 1321 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 A0A0G2JMZ2 1700 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 NUCB2P80303 420 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 UBE2SQ16763 222 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 NOM1Q5C9Z4 860 aaKnown RBP22.06■■□□□ 1.12
PSPC1-203ENST00000471658 PPP1R18Q6NYC8 613 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 ANKRD13CQ8N6S4 541 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 TRERF1Q96PN7 1200 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 PSTPIP2Q9H939 334 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 PCDHA4Q9UN74 947 aa22.06■■□□□ 1.12
PSPC1-203ENST00000471658 MRPL11Q9Y3B7 192 aaKnown RBP22.06■■□□□ 1.12
PSPC1-203ENST00000471658 ESYT2A0FGR8 921 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 NFIBO00712 420 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 HSPA6P17066 643 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 ADCY7P51828 1080 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 BLIDQ8IZY5 108 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 MOV10L1Q9BXT6 1211 aaKnown RBP22.05■■□□□ 1.12
PSPC1-203ENST00000471658 C6orf50Q9HD87 102 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 ZCCHC17Q9NP64 241 aaKnown RBP22.05■■□□□ 1.12
PSPC1-203ENST00000471658 RIC8AQ9NPQ8 531 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 RNF146Q9NTX7 359 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 TMEM260Q9NX78 707 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 CPA4Q9UI42 421 aa22.05■■□□□ 1.12
PSPC1-203ENST00000471658 CALML3P27482 149 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 KRT2P35908 639 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 ERVK-9P63128 1117 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 ERVK-24P63145 666 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 RESTQ13127 1097 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 SAFBQ15424 915 aaKnown RBP eCLIP22.04■■□□□ 1.12
PSPC1-203ENST00000471658 EARS2Q5JPH6 523 aaKnown RBP22.04■■□□□ 1.12
PSPC1-203ENST00000471658 USP17L6PQ6QN14 398 aa22.04■■□□□ 1.12
PSPC1-203ENST00000471658 BIN2Q9UBW5 565 aaPredicted RBP22.04■■□□□ 1.12
PSPC1-203ENST00000471658 M0R2N6 131 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 F13A1P00488 732 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 GCLCP48506 637 aaPredicted RBP22.03■■□□□ 1.12
PSPC1-203ENST00000471658 TRAF1Q13077 416 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 FAM173BQ6P4H8 233 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 RIOX2Q8IUF8 465 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 RGS22Q8NE09 1264 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 PCDHA6Q9UN73 950 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 PCDHA8Q9Y5H6 950 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 ADGRA2Q96PE1 1338 aa22.03■■□□□ 1.12
PSPC1-203ENST00000471658 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 MEIS2O14770 477 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 CFBP00751 764 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 GNA11P29992 359 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 HOXA13P31271 388 aaPredicted RBP22.02■■□□□ 1.12
PSPC1-203ENST00000471658 CRHR2Q13324 411 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 FOXD4L6Q3SYB3 417 aaPredicted RBP22.02■■□□□ 1.12
PSPC1-203ENST00000471658 JAKMIP3Q5VZ66 844 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 FOXD4L3Q6VB84 417 aaPredicted RBP22.02■■□□□ 1.12
PSPC1-203ENST00000471658 NCAPG2Q86XI2 1143 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 DAGLBQ8NCG7 672 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 GPRC5AQ8NFJ5 357 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 GTF3C2Q8WUA4 911 aaPredicted RBP22.02■■□□□ 1.12
PSPC1-203ENST00000471658 CUL5Q93034 780 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 TNFRSF25Q93038 417 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 CHAMP1Q96JM3 812 aa22.02■■□□□ 1.12
PSPC1-203ENST00000471658 MAP2K2P36507 400 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 MRPL12P52815 198 aaKnown RBP22.02■■□□□ 1.11
PSPC1-203ENST00000471658 FAM177A1Q8N128 213 aaPredicted RBP22.02■■□□□ 1.11
PSPC1-203ENST00000471658 PGBD1Q96JS3 809 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 PORCNQ9H237 461 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 ZFYVE28Q9HCC9 887 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 MORF4L1Q9UBU8 362 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 PNMA2Q9UL42 364 aa22.02■■□□□ 1.11
PSPC1-203ENST00000471658 PDIA4P13667 645 aaKnown RBP22.01■■□□□ 1.11
PSPC1-203ENST00000471658 ERCC3P19447 782 aa22.01■■□□□ 1.11
PSPC1-203ENST00000471658 U2AF2P26368 475 aaKnown RBP eCLIP22.01■■□□□ 1.111e-6■■■□□ 16
PSPC1-203ENST00000471658 GNL2Q13823 731 aaKnown RBP22.01■■□□□ 1.11
PSPC1-203ENST00000471658 TKFCQ3LXA3 575 aa22.01■■□□□ 1.11
PSPC1-203ENST00000471658 GALNT17Q6IS24 598 aa22.01■■□□□ 1.11
PSPC1-203ENST00000471658 FOXP1Q9H334 677 aaPredicted RBP22.01■■□□□ 1.11
PSPC1-203ENST00000471658 BRMS1Q9HCU9 246 aa22.01■■□□□ 1.11
PSPC1-203ENST00000471658 CA12O43570 354 aa22■■□□□ 1.11
PSPC1-203ENST00000471658 TLR2O60603 784 aa22■■□□□ 1.11
PSPC1-203ENST00000471658 CLK2P49760 499 aaKnown RBP22■■□□□ 1.11
PSPC1-203ENST00000471658 EFCC1Q9HA90 598 aa22■■□□□ 1.11
PSPC1-203ENST00000471658 ECM2O94769 699 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms