RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ADAMTS4O75173 837 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 GOLGA8HP0CJ92 632 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 ASPRV1Q53RT3 343 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 STOX1Q6ZVD7 989 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 SENP6Q9GZR1 1112 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-208ENST00000470045 FAM184BQ9ULE4 1060 aa16.47■□□□□ 0.23
COMMD3-208ENST00000470045 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
COMMD3-208ENST00000470045 E7EWF7 191 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 NFIBO00712 420 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 TRDNQ13061 729 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 SNX17Q15036 470 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 MORC4Q8TE76 937 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 CLEC4DQ8WXI8 215 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 LENG1Q96BZ8 264 aaPredicted RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 ESYT1Q9BSJ8 1104 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 PHF24Q9UPV7 400 aa16.46■□□□□ 0.23
COMMD3-208ENST00000470045 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
COMMD3-208ENST00000470045 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 ASB14A6NK59 587 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 ADCY6O43306 1168 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
COMMD3-208ENST00000470045 PGK1P00558 417 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 RNF180Q86T96 592 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 GDF15Q99988 308 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
COMMD3-208ENST00000470045 ZMYND8Q9ULU4 1186 aaPredicted RBP16.45■□□□□ 0.22
COMMD3-208ENST00000470045 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 CST5P28325 142 aaPredicted RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 CCDC144BQ3MJ40 725 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 MB21D2Q8IYB1 491 aaPredicted RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 ADGRF4Q8IZF3 695 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 KLHDC9Q8NEP7 349 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
COMMD3-208ENST00000470045 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
COMMD3-208ENST00000470045 A0A1W2PPC1 479 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 ADCYAP1R1P41586 468 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 ANTXR2P58335 489 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 RTP1P59025 263 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 NKX3-2P78367 333 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 BAATQ14032 418 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 CCSAPQ6IQ19 270 aaPredicted RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 SLC30A10Q6XR72 485 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 SLC39A5Q6ZMH5 540 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 RALYLQ86SE5 291 aaKnown RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 PURBQ96QR8 312 aaKnown RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 TSEN34Q9BSV6 310 aaKnown RBP16.43■□□□□ 0.22
COMMD3-208ENST00000470045 MAF1Q9H063 256 aa16.43■□□□□ 0.22
COMMD3-208ENST00000470045 SYN1P17600 705 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 BMP8BP34820 402 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 ALDH5A1P51649 535 aaPredicted RBP16.42■□□□□ 0.22
COMMD3-208ENST00000470045 GJA9P57773 515 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 RGS22Q8NE09 1264 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 JMJD4Q9H9V9 463 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 ADD3Q9UEY8 706 aaKnown RBP16.42■□□□□ 0.22
COMMD3-208ENST00000470045 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
COMMD3-208ENST00000470045 DDX49Q9Y6V7 483 aaKnown RBP16.42■□□□□ 0.22
COMMD3-208ENST00000470045 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-208ENST00000470045 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
COMMD3-208ENST00000470045 MYADML2A6NDP7 307 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 MOXD2PA6NHM9 499 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
COMMD3-208ENST00000470045 CTAGE5O15320 804 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 RPS6P62753 249 aaKnown RBP16.41■□□□□ 0.22
COMMD3-208ENST00000470045 GRM4Q14833 912 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 NECTIN1Q15223 517 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 RNF207Q6ZRF8 634 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 FERMT2Q96AC1 680 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 MTA3Q9BTC8 594 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 ABCB11O95342 1321 aa16.41■□□□□ 0.22
COMMD3-208ENST00000470045 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.4■□□□□ 0.22
COMMD3-208ENST00000470045 ERICH2A1L162 156 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 SLC27A2O14975 620 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 EDNRBP24530 442 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 MAGEA10P43363 369 aaPredicted RBP16.4■□□□□ 0.22
COMMD3-208ENST00000470045 ACLYP53396 1101 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms