RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 PHF20Q9BVI0 1012 aa23.95■■□□□ 1.42
BRAF-202ENST00000469930 TXNRD2Q9NNW7 524 aa23.95■■□□□ 1.42
BRAF-202ENST00000469930 FOXD4L1Q9NU39 408 aa23.95■■□□□ 1.42
BRAF-202ENST00000469930 MAP3K20Q9NYL2 800 aaKnown RBP23.95■■□□□ 1.42
BRAF-202ENST00000469930 CEP350Q5VT06 3117 aa23.95■■□□□ 1.42
BRAF-202ENST00000469930 SYT1P21579 422 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 CALML3P27482 149 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 ERVK-9P63128 1117 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 ERVK-24P63145 666 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 TYW1BQ6NUM6 668 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 SAMD1Q6SPF0 538 aaPredicted RBP23.94■■□□□ 1.42
BRAF-202ENST00000469930 CPXCR1Q8N123 301 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 DAGLBQ8NCG7 672 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 CHST13Q8NET6 341 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 GPKOWQ92917 476 aaPredicted RBP eCLIP23.94■■□□□ 1.42
BRAF-202ENST00000469930 COA7Q96BR5 231 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 SHISA4Q96DD7 197 aa23.94■■□□□ 1.42
BRAF-202ENST00000469930 DTNBO60941 627 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 GNA11P29992 359 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 NAPAP54920 295 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 CCNA1P78396 465 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 TRIM29Q14134 588 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 SNRNP48Q6IEG0 339 aaKnown RBP23.93■■□□□ 1.42
BRAF-202ENST00000469930 VPS54Q9P1Q0 977 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 FBXO40Q9UH90 709 aa23.93■■□□□ 1.42
BRAF-202ENST00000469930 CIZ1Q9ULV3 898 aaPredicted RBP23.93■■□□□ 1.42
BRAF-202ENST00000469930 PIK3CDO00329 1044 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 Q3C1V9 767 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 KRT40Q6A162 431 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 MCF2L2Q86YR7 1114 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 SPRYD3Q8NCJ5 442 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 CLEC4DQ8WXI8 215 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 MOV10L1Q9BXT6 1211 aaKnown RBP23.92■■□□□ 1.42
BRAF-202ENST00000469930 MROH8Q9H579 483 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 C6orf50Q9HD87 102 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 RIC8AQ9NPQ8 531 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 RIPK3Q9Y572 518 aa23.92■■□□□ 1.42
BRAF-202ENST00000469930 MMP1P03956 469 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 MRPL12P52815 198 aaKnown RBP23.91■■□□□ 1.42
BRAF-202ENST00000469930 CRHR2Q13324 411 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 NPY5RQ15761 445 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 USH1GQ495M9 461 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 MCTP2Q6DN12 878 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 DNAJC5GQ8N7S2 189 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 BICD2Q8TD16 824 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 TRERF1Q96PN7 1200 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 PAGR1Q9BTK6 254 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 SAGE1Q9NXZ1 904 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 PCDHA4Q9UN74 947 aa23.91■■□□□ 1.42
BRAF-202ENST00000469930 SMCO2A6NFE2 343 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 OPLAHO14841 1288 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 STX6O43752 255 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 ALAS1P13196 640 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 NLRP5P59047 1200 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 NOM1Q5C9Z4 860 aaKnown RBP23.9■■□□□ 1.42
BRAF-202ENST00000469930 ANKRD13CQ8N6S4 541 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 PSTPIP2Q9H939 334 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 RNF146Q9NTX7 359 aa23.9■■□□□ 1.42
BRAF-202ENST00000469930 M0R2N6 131 aa23.89■■□□□ 1.41
BRAF-202ENST00000469930 PLS1Q14651 629 aa23.89■■□□□ 1.41
BRAF-202ENST00000469930 CUL5Q93034 780 aa23.89■■□□□ 1.41
BRAF-202ENST00000469930 ACAD9Q9H845 621 aa23.89■■□□□ 1.41
BRAF-202ENST00000469930 RNF186Q9NXI6 227 aa23.89■■□□□ 1.41
BRAF-202ENST00000469930 H3BQV1 296 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 CLK2P49760 499 aaKnown RBP23.88■■□□□ 1.41
BRAF-202ENST00000469930 HSD17B4P51659 736 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 ADCY7P51828 1080 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 MAP2K1Q02750 393 aaPredicted RBP23.88■■□□□ 1.41
BRAF-202ENST00000469930 SAFBQ15424 915 aaKnown RBP eCLIP23.88■■□□□ 1.41
BRAF-202ENST00000469930 BLIDQ8IZY5 108 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 FOXP1Q9H334 677 aaPredicted RBP23.88■■□□□ 1.41
BRAF-202ENST00000469930 BRMS1Q9HCU9 246 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 GJB4Q9NTQ9 266 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 MTMR6Q9Y217 621 aa23.88■■□□□ 1.41
BRAF-202ENST00000469930 ERCC3P19447 782 aa23.87■■□□□ 1.41
BRAF-202ENST00000469930 U2AF2P26368 475 aaKnown RBP eCLIP23.87■■□□□ 1.413e-11■■■■□ 22.8
BRAF-202ENST00000469930 NUCB2P80303 420 aa23.87■■□□□ 1.41
BRAF-202ENST00000469930 ABRAQ8N0Z2 381 aa23.87■■□□□ 1.41
BRAF-202ENST00000469930 CPA4Q9UI42 421 aa23.87■■□□□ 1.41
BRAF-202ENST00000469930 KCNJ14Q9UNX9 436 aa23.87■■□□□ 1.41
BRAF-202ENST00000469930 SMCHD1A6NHR9 2005 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 MEIS2O14770 477 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 STRNO43815 780 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 MAPK4P31152 587 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 KRT2P35908 639 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 MUM1L1Q5H9M0 696 aa23.86■■□□□ 1.41
BRAF-202ENST00000469930 GCOM1H8Y6P7 765 aaPredicted RBP23.85■■□□□ 1.41
BRAF-202ENST00000469930 NFIBO00712 420 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 BRD1O95696 1058 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 FOSP01100 380 aaPredicted RBP23.85■■□□□ 1.41
BRAF-202ENST00000469930 POLR2MP0CAP2 368 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 AP3B2Q13367 1082 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 NCAPG2Q86XI2 1143 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 DIS3L2Q8IYB7 885 aaKnown RBP23.85■■□□□ 1.41
BRAF-202ENST00000469930 TNFRSF25Q93038 417 aa23.85■■□□□ 1.41
BRAF-202ENST00000469930 PFASO15067 1338 aa23.84■■□□□ 1.41
BRAF-202ENST00000469930 PEX10O60683 326 aa23.84■■□□□ 1.41
BRAF-202ENST00000469930 REXO1Q8N1G1 1221 aaKnown RBP23.84■■□□□ 1.41
BRAF-202ENST00000469930 PORCNQ9H237 461 aa23.84■■□□□ 1.41
BRAF-202ENST00000469930 ZSCAN16Q9H4T2 348 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms