RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 SMCHD1A6NHR9 2005 aa9.93□□□□□ -0.82
SSBP1-208ENST00000469123 RPTORQ8N122 1335 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 SYNGAP1Q96PV0 1343 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 KLF18A0A0U1RQI7 1052 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 hCG_1984214I3L0E3 225 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 MSCO60682 206 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 PEX10O60683 326 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 INHAP05111 366 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 RTN1Q16799 776 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 QRICH1Q2TAL8 776 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 TMTC3Q6ZXV5 915 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 STAG2Q8N3U4 1231 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 ZNF713Q8N859 430 aaPredicted RBP9.92□□□□□ -0.82
SSBP1-208ENST00000469123 BRF1Q92994 677 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
SSBP1-208ENST00000469123 LRRC2Q9BYS8 371 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 JMJD4Q9H9V9 463 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 SENP2Q9HC62 589 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 PDRG1Q9NUG6 133 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 ADD3Q9UEY8 706 aaKnown RBP9.92□□□□□ -0.82
SSBP1-208ENST00000469123 RIPK3Q9Y572 518 aa9.92□□□□□ -0.82
SSBP1-208ENST00000469123 DNAJC25-GNG10A0A024R161 153 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 ASB14A6NK59 587 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 GOLGA8AA7E2F4 631 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 GOLGA8BA8MQT2 603 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 POTEB2H3BUK9 544 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 METAP2P50579 478 aaKnown RBP eCLIP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 ZNF792Q3KQV3 632 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 MAP3K21Q5TCX8 1036 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 CPLX2Q6PUV4 134 aaKnown RBP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 MAMDC4Q6UXC1 1216 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 DNERQ8NFT8 737 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 TRIB2Q92519 343 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 ZNF274Q96GC6 653 aaPredicted RBP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 MAML3Q96JK9 1138 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 GLT8D2Q9H1C3 349 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 HMX1Q9NP08 348 aaPredicted RBP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 A1CFQ9NQ94 594 aaKnown RBP9.91□□□□□ -0.82
SSBP1-208ENST00000469123 HOMER2Q9NSB8 354 aa9.91□□□□□ -0.82
SSBP1-208ENST00000469123 CCDC85CA6NKD9 419 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 COBLO75128 1261 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 IGHA2P01877 340 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 GJB1P08034 283 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 ELNP15502 786 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 SLC4A3P48751 1232 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 RBM25P49756 843 aaKnown RBP9.9□□□□□ -0.82
SSBP1-208ENST00000469123 GHRHRQ02643 423 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 RNF207Q6ZRF8 634 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 FAM177A1Q8N128 213 aaPredicted RBP9.9□□□□□ -0.82
SSBP1-208ENST00000469123 NPLOC4Q8TAT6 608 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 SH3TC2Q8TF17 1288 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 MYL10Q9BUA6 226 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 C22orf23Q9BZE7 217 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 RNF208Q9H0X6 261 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 VAT1LQ9HCJ6 419 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
SSBP1-208ENST00000469123 CYP39A1Q9NYL5 469 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 CNPY2Q9Y2B0 182 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 PCDHA1Q9Y5I3 950 aa9.9□□□□□ -0.82
SSBP1-208ENST00000469123 MCM3APO60318 1980 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 PTPDC1A2A3K4 754 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 CYTH3O43739 400 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 CDKL5O76039 1030 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 CCL5P13501 91 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 PRKAR2AP13861 404 aaKnown RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 SNAP25P60880 206 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 AKAP17AQ02040 695 aaKnown RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 APOBRQ0VD83 1088 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 USH1GQ495M9 461 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 NSMFQ6X4W1 530 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 SRBD1Q8N5C6 995 aaKnown RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 FAM133AQ8N9E0 248 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 CLEC4DQ8WXI8 215 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 PIGSQ96S52 555 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 UPF3BQ9BZI7 483 aaKnown RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 PAK6Q9NQU5 681 aaPredicted RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 BRPF3Q9ULD4 1205 aa9.89□□□□□ -0.83
SSBP1-208ENST00000469123 NAP1L2Q9ULW6 460 aaPredicted RBP9.89□□□□□ -0.83
SSBP1-208ENST00000469123 CNTNAP5Q8WYK1 1306 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 HTTP42858 3142 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 NFIBO00712 420 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CPLX1O14810 134 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 PLEKHA8P1O95397 391 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 SEC24BO95487 1268 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 PGK2P07205 417 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CYBAP13498 195 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CPA1P15085 419 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 IFNAR1P17181 557 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 GJA8P48165 433 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 RPS6P62753 249 aaKnown RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 COL9A3Q14050 684 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 TOB2Q14106 344 aaPredicted RBP9.88□□□□□ -0.83
SSBP1-208ENST00000469123 RABEP1Q15276 862 aa9.88□□□□□ -0.83
SSBP1-208ENST00000469123 MUM1L1Q5H9M0 696 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms