RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DEKP35659 375 aaKnown RBP16.89■□□□□ 0.29
COL27A1-203ENST00000468565 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
COL27A1-203ENST00000468565 RALYLQ86SE5 291 aaKnown RBP16.89■□□□□ 0.29
COL27A1-203ENST00000468565 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
COL27A1-203ENST00000468565 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 TAL1P17542 331 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-203ENST00000468565 ANO1Q5XXA6 986 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.88■□□□□ 0.29
COL27A1-203ENST00000468565 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 PARP1P09874 1014 aaKnown RBP16.88■□□□□ 0.29
COL27A1-203ENST00000468565 RARBP10826 455 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 ARMCX2Q7L311 632 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 ABHD16BQ9H3Z7 469 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
COL27A1-203ENST00000468565 CNTN2Q02246 1040 aa16.87■□□□□ 0.29
COL27A1-203ENST00000468565 ERICH2A1L162 156 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 ASB14A6NK59 587 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 KBTBD13C9JR72 458 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 GJC2Q5T442 439 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 NSMFQ6X4W1 530 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 ZHX1Q9UKY1 873 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 IFIT3O14879 490 aaKnown RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 LRRC41Q15345 812 aa16.86■□□□□ 0.29
COL27A1-203ENST00000468565 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 SENP6Q9GZR1 1112 aaPredicted RBP16.86■□□□□ 0.29
COL27A1-203ENST00000468565 EIF5BO60841 1220 aaKnown RBP16.85■□□□□ 0.29
COL27A1-203ENST00000468565 CDC37Q16543 378 aaPredicted RBP16.85■□□□□ 0.29
COL27A1-203ENST00000468565 CASC1Q6TDU7 716 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 ADGRF4Q8IZF3 695 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 CLEC4DQ8WXI8 215 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 MAF1Q9H063 256 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 KATNBL1Q9H079 304 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
COL27A1-203ENST00000468565 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 NFIBO00712 420 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 CDC45O75419 566 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 WTAPQ15007 396 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
COL27A1-203ENST00000468565 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 LRRC26Q2I0M4 334 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 C7orf61Q8IZ16 206 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 ANO2Q9NQ90 1003 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 BAZ2BQ9UIF8 2168 aaKnown RBP16.84■□□□□ 0.29
COL27A1-203ENST00000468565 ASTN1O14525 1302 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 SLC27A2O14975 620 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 ANTXR2P58335 489 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-203ENST00000468565 RNF180Q86T96 592 aa16.84■□□□□ 0.29
COL27A1-203ENST00000468565 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
COL27A1-203ENST00000468565 ADAMTS4O75173 837 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 DUSP11O75319 330 aaKnown RBP16.83■□□□□ 0.28
COL27A1-203ENST00000468565 PLCB2Q00722 1185 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 CREB3L3Q68CJ9 461 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 RGS22Q8NE09 1264 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 PHF24Q9UPV7 400 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 COLQQ9Y215 455 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-203ENST00000468565 ABCB11O95342 1321 aa16.83■□□□□ 0.28
COL27A1-203ENST00000468565 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 GRM4Q14833 912 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 CCDC144BQ3MJ40 725 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 USH1GQ495M9 461 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 TMEM67Q5HYA8 995 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 CHST3Q7LGC8 479 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 STAG2Q8N3U4 1231 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 SYNRGQ9UMZ2 1314 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 KLRF2D3W0D1 207 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 DHX16O60231 1041 aaKnown RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 PGK1P00558 417 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 ALDH5A1P51649 535 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 HABP4Q5JVS0 413 aaKnown RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 SLC30A10Q6XR72 485 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 LENG1Q96BZ8 264 aaPredicted RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
COL27A1-203ENST00000468565 SENP2Q9HC62 589 aa16.82■□□□□ 0.28
COL27A1-203ENST00000468565 MCM5P33992 734 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 TROAPQ12815 778 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 KLHDC9Q8NEP7 349 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 UPF3AQ9H1J1 476 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms