RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 UBXN2AP68543 259 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 TROAPQ12815 778 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 MAP2K5Q13163 448 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 KCTD2Q14681 263 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 TKFCQ3LXA3 575 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 MORN1Q5T089 497 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 BTNL9Q6UXG8 535 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 SYNE3Q6ZMZ3 975 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 SGMS1Q86VZ5 419 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 HOMER1Q86YM7 354 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 RAB11FIP4Q86YS3 637 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 CCDC144CPQ8IYA2 1237 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 ABRAQ8N0Z2 381 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 TMTC2Q8N394 836 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 STAG2Q8N3U4 1231 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 CHST13Q8NET6 341 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 IGDCC4Q8TDY8 1250 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 PXYLP1Q8TE99 480 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 SH3TC2Q8TF17 1288 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 TRIB2Q92519 343 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 AGBL1Q96MI9 1066 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 MMP19Q99542 508 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 USP26Q9BXU7 913 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 UPF3BQ9BZI7 483 aaKnown RBP4.22□□□□□ -1.73
COMMD3-207ENST00000468469 UBA5Q9GZZ9 404 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 CPVLQ9H3G5 476 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 ACAD9Q9H845 621 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 HOMER2Q9NSB8 354 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 RNF146Q9NTX7 359 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 SLC5A4Q9NY91 659 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 FBXO40Q9UH90 709 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 MAD2L2Q9UI95 211 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 PNMA2Q9UL42 364 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 NAP1L2Q9ULW6 460 aaPredicted RBP4.22□□□□□ -1.73
COMMD3-207ENST00000468469 PLXNB2O15031 1838 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 NID2Q14112 1375 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 RBBP6Q7Z6E9 1792 aaKnown RBP4.22□□□□□ -1.73
COMMD3-207ENST00000468469 MGAMO43451 1857 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 CASP8AP2Q9UKL3 1982 aa4.22□□□□□ -1.73
COMMD3-207ENST00000468469 PFASO15067 1338 aa4.21□□□□□ -1.73
COMMD3-207ENST00000468469 ABCB11O95342 1321 aa4.21□□□□□ -1.73
COMMD3-207ENST00000468469 LRRC37A2A6NM11 1700 aa4.21□□□□□ -1.73
COMMD3-207ENST00000468469 PALM3A6NDB9 673 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 CCDC85CA6NKD9 419 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ZBTB5O15062 677 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ZBTB43O43298 467 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 STRNO43815 780 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 PLEKHA8P1O95397 391 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 MYCP01106 439 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 PGK2P07205 417 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 XRCC5P13010 732 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 LIFRP42702 1097 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 GNAQP50148 359 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 METAP2P50579 478 aaKnown RBP eCLIP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 RCAN1P53805 252 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 SOX10P56693 466 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 EXOSC10Q01780 885 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 APOBRQ0VD83 1088 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 RTN1Q16799 776 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 QRICH1Q2TAL8 776 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 USH1GQ495M9 461 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 APOA5Q6Q788 366 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 SLC30A10Q6XR72 485 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 Q6ZUG5 572 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 TMTC3Q6ZXV5 915 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 RUFY3Q7L099 469 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 NBPF11Q86T75 865 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 DPP9Q86TI2 863 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 TRMT44Q8IYL2 757 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ANKRD35Q8N283 1001 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 NPLOC4Q8TAT6 608 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 BRF1Q92994 677 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ARMC5Q96C12 935 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 DDX11Q96FC9 970 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 ZNF333Q96JL9 665 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 MAP3K14Q99558 947 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 SPZ1Q9BXG8 430 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 TM6SF1Q9BZW5 370 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 UPF2Q9HAU5 1272 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 PDRG1Q9NUG6 133 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 RBM28Q9NW13 759 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 BIN2Q9UBW5 565 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 SEC63Q9UGP8 760 aaKnown RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 BRPF3Q9ULD4 1205 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 RIPK3Q9Y572 518 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 CYP46A1Q9Y6A2 500 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 COL11A1P12107 1806 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-207ENST00000468469 CNTNAP5Q8WYK1 1306 aa4.21□□□□□ -1.74
COMMD3-207ENST00000468469 CCDC196A0A1B0GTZ2 297 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 PTPDC1A2A3K4 754 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 NFIBO00712 420 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 CYTH3O43739 400 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 PPP1R11O60927 126 aaPredicted RBP4.2□□□□□ -1.74
COMMD3-207ENST00000468469 COBLO75128 1261 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 HOXC6P09630 235 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 CALML3P27482 149 aa4.2□□□□□ -1.74
COMMD3-207ENST00000468469 LSM11P83369 360 aaKnown RBP eCLIP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms