RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 DNM1LO00429 736 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 SLC27A2O14975 620 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 AKR1A1P14550 325 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 SYN1P17600 705 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 CALML3P27482 149 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 ANTXR2P58335 489 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
CDHR3-205ENST00000468143 WTAPQ15007 396 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 CDC37Q16543 378 aaPredicted RBP13.49□□□□□ -0.25
CDHR3-205ENST00000468143 ASPRV1Q53RT3 343 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 CLEC4DQ8WXI8 215 aa13.49□□□□□ -0.25
CDHR3-205ENST00000468143 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
CDHR3-205ENST00000468143 ASTN1O14525 1302 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 KBTBD13C9JR72 458 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 KLRF2D3W0D1 207 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
CDHR3-205ENST00000468143 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 CCDC144BQ3MJ40 725 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 CREB3L3Q68CJ9 461 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 EEPD1Q7L9B9 569 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 MB21D2Q8IYB1 491 aaPredicted RBP13.48□□□□□ -0.25
CDHR3-205ENST00000468143 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
CDHR3-205ENST00000468143 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
CDHR3-205ENST00000468143 ASB14A6NK59 587 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 ADCY6O43306 1168 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 CDC45O75419 566 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 QRICH1Q2TAL8 776 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 RNF207Q6ZRF8 634 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 IGDCC4Q8TDY8 1250 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 TBC1D5Q92609 795 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 KATNBL1Q9H079 304 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
CDHR3-205ENST00000468143 WDR19Q8NEZ3 1342 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.46□□□□□ -0.25
CDHR3-205ENST00000468143 PALM3A6NDB9 673 aaPredicted RBP13.46□□□□□ -0.25
CDHR3-205ENST00000468143 PRC1O43663 620 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 PTGS1P23219 599 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
CDHR3-205ENST00000468143 HABP4Q5JVS0 413 aaKnown RBP13.46□□□□□ -0.25
CDHR3-205ENST00000468143 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 NOL8Q76FK4 1167 aaKnown RBP13.46□□□□□ -0.25
CDHR3-205ENST00000468143 RNF180Q86T96 592 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 MYL10Q9BUA6 226 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
CDHR3-205ENST00000468143 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 ALDH5A1P51649 535 aaPredicted RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 RPS6P62753 249 aaKnown RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 TNFAIP2Q03169 654 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 GRM4Q14833 912 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 SLC35G1Q2M3R5 365 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 TMEM63BQ5T3F8 832 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 CATIPQ7Z7H3 387 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 FBXO11Q86XK2 927 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 FBXO16Q8IX29 292 aaPredicted RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 PIBF1Q8WXW3 757 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 LRRC2Q9BYS8 371 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 RBM27Q9P2N5 1060 aaKnown RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
CDHR3-205ENST00000468143 ATP11BQ9Y2G3 1177 aa13.45□□□□□ -0.26
CDHR3-205ENST00000468143 ABCB11O95342 1321 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 PPP1R11O60927 126 aaPredicted RBP13.44□□□□□ -0.26
CDHR3-205ENST00000468143 DUSP11O75319 330 aaKnown RBP13.44□□□□□ -0.26
CDHR3-205ENST00000468143 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
CDHR3-205ENST00000468143 MCM5P33992 734 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 RTP1P59025 263 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 TROAPQ12815 778 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 KCNA10Q16322 511 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 RAB11FIP4Q86YS3 637 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 PIGSQ96S52 555 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 PHF24Q9UPV7 400 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 PLXNA1Q9UIW2 1896 aa13.44□□□□□ -0.26
CDHR3-205ENST00000468143 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
CDHR3-205ENST00000468143 DYNC1LI2O43237 492 aaPredicted RBP13.43□□□□□ -0.26
CDHR3-205ENST00000468143 SMPD1P17405 629 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 RXRAP19793 462 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 ACLYP53396 1101 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 BEX3Q00994 111 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 TRIM60Q495X7 471 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 ZNF654Q8IZM8 581 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 KLHDC9Q8NEP7 349 aa13.43□□□□□ -0.26
CDHR3-205ENST00000468143 TAAR1Q96RJ0 339 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms