RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 CEP290O15078 2479 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 DNM1LO00429 736 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 NFIBO00712 420 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ZNF865P0CJ78 1059 aaPredicted RBP14.24□□□□□ -0.13
XRN1-204ENST00000465074 AKR1A1P14550 325 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ADCYAP1R1P41586 468 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 BAATQ14032 418 aaPredicted RBP14.24□□□□□ -0.13
XRN1-204ENST00000465074 WTAPQ15007 396 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 SART3Q15020 963 aaKnown RBP14.24□□□□□ -0.13
XRN1-204ENST00000465074 LRRC26Q2I0M4 334 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ASPRV1Q53RT3 343 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 TMEM67Q5HYA8 995 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ARMCX2Q7L311 632 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 EEPD1Q7L9B9 569 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
XRN1-204ENST00000465074 ADGRF4Q8IZF3 695 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 LSG1Q9H089 658 aaKnown RBP14.24□□□□□ -0.13
XRN1-204ENST00000465074 CYP39A1Q9NYL5 469 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
XRN1-204ENST00000465074 COL6A1P12109 1028 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 LRRC41Q15345 812 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 SEC23AQ15436 765 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 CDC37Q16543 378 aaPredicted RBP14.23□□□□□ -0.13
XRN1-204ENST00000465074 CCDC144BQ3MJ40 725 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 MAMDC4Q6UXC1 1216 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 STAG2Q8N3U4 1231 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 MSL3Q8N5Y2 521 aaKnown RBP14.23□□□□□ -0.13
XRN1-204ENST00000465074 FAM133AQ8N9E0 248 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 FGD4Q96M96 766 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 SENP2Q9HC62 589 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 PCDH10Q9P2E7 1040 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 ATP11BQ9Y2G3 1177 aa14.23□□□□□ -0.13
XRN1-204ENST00000465074 ASB14A6NK59 587 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 SLC27A2O14975 620 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 CDC45O75419 566 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 CREB3L3Q68CJ9 461 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 SLC30A10Q6XR72 485 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 NFXL1Q6ZNB6 911 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 RNF207Q6ZRF8 634 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.22□□□□□ -0.13
XRN1-204ENST00000465074 RNF180Q86T96 592 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 PIBF1Q8WXW3 757 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 ABHD16BQ9H3Z7 469 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 DNAH12Q6ZR08 3092 aa14.22□□□□□ -0.13
XRN1-204ENST00000465074 PRC1O43663 620 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 CATIPQ7Z7H3 387 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 FBXO11Q86XK2 927 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 HOMER1Q86YM7 354 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 CLEC4DQ8WXI8 215 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 VTI1AQ96AJ9 217 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 JMJD4Q9H9V9 463 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 GPHNQ9NQX3 736 aaPredicted RBP14.21□□□□□ -0.13
XRN1-204ENST00000465074 ADD3Q9UEY8 706 aaKnown RBP14.21□□□□□ -0.13
XRN1-204ENST00000465074 PNMA2Q9UL42 364 aa14.21□□□□□ -0.13
XRN1-204ENST00000465074 LCTP09848 1927 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 ABCB7O75027 752 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 C6orf222P0C671 652 aaPredicted RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 ANTXR2P58335 489 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 IRX5P78411 483 aaPredicted RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 TNFAIP2Q03169 654 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 QRICH1Q2TAL8 776 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 HABP4Q5JVS0 413 aaKnown RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 FBXO16Q8IX29 292 aaPredicted RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 MB21D2Q8IYB1 491 aaPredicted RBP14.2□□□□□ -0.14
XRN1-204ENST00000465074 SPC25Q9HBM1 224 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 MAD2L2Q9UI95 211 aa14.2□□□□□ -0.14
XRN1-204ENST00000465074 ASTN1O14525 1302 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 WDR19Q8NEZ3 1342 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.19□□□□□ -0.14
XRN1-204ENST00000465074 MCM5P33992 734 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 ALDH5A1P51649 535 aaPredicted RBP14.19□□□□□ -0.14
XRN1-204ENST00000465074 RTP1P59025 263 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
XRN1-204ENST00000465074 PDE4DQ08499 809 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 NECTIN1Q15223 517 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 RNF20Q5VTR2 975 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 SLC39A5Q6ZMH5 540 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 TBC1D5Q92609 795 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 MYL10Q9BUA6 226 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 PRDM5Q9NQX1 630 aaPredicted RBP14.19□□□□□ -0.14
XRN1-204ENST00000465074 PDGFCQ9NRA1 345 aa14.19□□□□□ -0.14
XRN1-204ENST00000465074 RBM27Q9P2N5 1060 aaKnown RBP14.19□□□□□ -0.14
XRN1-204ENST00000465074 ABCB11O95342 1321 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 PALM3A6NDB9 673 aaPredicted RBP14.18□□□□□ -0.14
XRN1-204ENST00000465074 MYADML2A6NDP7 307 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 ADCY6O43306 1168 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 DUSP11O75319 330 aaKnown RBP14.18□□□□□ -0.14
XRN1-204ENST00000465074 PTGS1P23219 599 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 BEX3Q00994 111 aa14.18□□□□□ -0.14
XRN1-204ENST00000465074 GRM4Q14833 912 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms