RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ANKRD35Q8N283 1001 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 RRP36Q96EU6 259 aaKnown RBP15.9■□□□□ 0.14
LIMD1-203ENST00000465039 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 ZNF274Q96GC6 653 aaPredicted RBP15.9■□□□□ 0.14
LIMD1-203ENST00000465039 TCEANC2Q96MN5 208 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
LIMD1-203ENST00000465039 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
LIMD1-203ENST00000465039 PLXNA1Q9UIW2 1896 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 hCG_1984214I3L0E3 225 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 CYTH3O43739 400 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 ZNF792Q3KQV3 632 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 MFSD14CQ5VZR4 134 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 ZNF713Q8N859 430 aaPredicted RBP15.89■□□□□ 0.13
LIMD1-203ENST00000465039 TRIB2Q92519 343 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 MYL10Q9BUA6 226 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 UPF3BQ9BZI7 483 aaKnown RBP15.89■□□□□ 0.13
LIMD1-203ENST00000465039 PDRG1Q9NUG6 133 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 SEC63Q9UGP8 760 aaKnown RBP15.89■□□□□ 0.13
LIMD1-203ENST00000465039 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
LIMD1-203ENST00000465039 ZNFX1Q9P2E3 1918 aaKnown RBP15.89■□□□□ 0.13
LIMD1-203ENST00000465039 SYNGAP1Q96PV0 1343 aa15.89■□□□□ 0.13
LIMD1-203ENST00000465039 GOLGA8AA7E2F4 631 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 INHAP05111 366 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CPA1P15085 419 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CYP2B6P20813 491 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.13
LIMD1-203ENST00000465039 TOB2Q14106 344 aaPredicted RBP15.88■□□□□ 0.13
LIMD1-203ENST00000465039 MAMDC4Q6UXC1 1216 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 FAM133AQ8N9E0 248 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CLEC4DQ8WXI8 215 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CHMP4CQ96CF2 233 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 MAML3Q96JK9 1138 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 C22orf23Q9BZE7 217 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CPVLQ9H3G5 476 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 CYP39A1Q9NYL5 469 aa15.88■□□□□ 0.13
LIMD1-203ENST00000465039 ADD3Q9UEY8 706 aaKnown RBP15.88■□□□□ 0.13
LIMD1-203ENST00000465039 KIAA0100Q14667 2235 aaKnown RBP15.87■□□□□ 0.13
LIMD1-203ENST00000465039 COBLO75128 1261 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 ELNP15502 786 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 FAM177A1Q8N128 213 aaPredicted RBP15.87■□□□□ 0.13
LIMD1-203ENST00000465039 CENPFP49454 3210 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 RPTORQ8N122 1335 aa15.87■□□□□ 0.13
LIMD1-203ENST00000465039 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 MSCO60682 206 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PLEKHA8P1O95397 391 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 SNAP25P60880 206 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 FUT2Q10981 343 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 MUM1L1Q5H9M0 696 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PPP1R18Q6NYC8 613 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 DNERQ8NFT8 737 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 SH3TC2Q8TF17 1288 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PIGSQ96S52 555 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 MPHOSPH6Q99547 160 aaKnown RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PAK6Q9NQU5 681 aaPredicted RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 CNTNAP5Q8WYK1 1306 aa15.86■□□□□ 0.13
LIMD1-203ENST00000465039 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
LIMD1-203ENST00000465039 ASB14A6NK59 587 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 B4DLN1 442 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 NFIBO00712 420 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 GJB1P08034 283 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 RXRAP19793 462 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 MRPL12P52815 198 aaKnown RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 CPLX2Q6PUV4 134 aaKnown RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 RNF207Q6ZRF8 634 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 HOMER1Q86YM7 354 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 NPLOC4Q8TAT6 608 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 MORC4Q8TE76 937 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 TINF2Q9BSI4 451 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 TMEM106CQ9BVX2 250 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 BACH2Q9BYV9 841 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 VAT1LQ9HCJ6 419 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 HMX1Q9NP08 348 aaPredicted RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 FAM217BQ9NTX9 383 aaPredicted RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
LIMD1-203ENST00000465039 SMCHD1A6NHR9 2005 aa15.85■□□□□ 0.13
LIMD1-203ENST00000465039 PPP1R11O60927 126 aaPredicted RBP15.84■□□□□ 0.13
LIMD1-203ENST00000465039 PGK2P07205 417 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 IFNAR1P17181 557 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 SLC4A3P48751 1232 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 HSD17B4P51659 736 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 RPS6P62753 249 aaKnown RBP15.84■□□□□ 0.13
LIMD1-203ENST00000465039 RABEP1Q15276 862 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 USH1GQ495M9 461 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 NSMFQ6X4W1 530 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 RNF26Q9BY78 433 aaPredicted RBP15.84■□□□□ 0.13
LIMD1-203ENST00000465039 GLT8D2Q9H1C3 349 aa15.84■□□□□ 0.13
LIMD1-203ENST00000465039 PIK3CDO00329 1044 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CDKL5O76039 1030 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CYBAP13498 195 aa15.83■□□□□ 0.12
LIMD1-203ENST00000465039 CCL5P13501 91 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms