RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DHX8Q14562 1220 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 GLT8D2Q9H1C3 349 aa24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
PDLIM2-216ENST00000464275 GTPBP6O43824 516 aaPredicted RBP24.58■■□□□ 1.52
PDLIM2-216ENST00000464275 CLK2P49760 499 aaKnown RBP24.58■■□□□ 1.52
PDLIM2-216ENST00000464275 RRP1BQ14684 758 aaKnown RBP24.58■■□□□ 1.52
PDLIM2-216ENST00000464275 IFNKQ9P0W0 207 aa24.58■■□□□ 1.52
PDLIM2-216ENST00000464275 ATAD5Q96QE3 1844 aa24.58■■□□□ 1.52
PDLIM2-216ENST00000464275 UBA7P41226 1012 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 STAT6P42226 847 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 JAG1P78504 1218 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 FANCCQ00597 558 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 CIAPIN1Q6FI81 312 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 C17orf53Q8N3J3 647 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 XPO4Q9C0E2 1151 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 DISC1Q9NRI5 854 aa24.57■■□□□ 1.52
PDLIM2-216ENST00000464275 ERCC5P28715 1186 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 QRICH1Q2TAL8 776 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 CCDC144BQ3MJ40 725 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 FAM83AQ86UY5 434 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 ENOX1Q8TC92 643 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 JDP2Q8WYK2 163 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 ZBED3Q96IU2 234 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 NDUFB10O96000 172 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 RBM10P98175 930 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 KARSQ15046 597 aaKnown RBP24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 VEZTQ9HBM0 779 aa24.56■■□□□ 1.52
PDLIM2-216ENST00000464275 TBC1D12O60347 775 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 CDC25AP30304 524 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 MMP14P50281 582 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 CDC37Q16543 378 aaPredicted RBP24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 RRAGBQ5VZM2 374 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 PSTPIP2Q9H939 334 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 IMPACTQ9P2X3 320 aa24.55■■□□□ 1.52
PDLIM2-216ENST00000464275 CBFA2T2O43439 604 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 CASP1P29466 404 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 ARHGEF10LQ9HCE6 1279 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 FANCLQ9NW38 375 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 BMP3P12645 472 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 TNIP1Q15025 636 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 RASSF8Q8NHQ8 419 aa24.54■■□□□ 1.52
PDLIM2-216ENST00000464275 PP2D1A8MPX8 630 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 UBE2SQ16763 222 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 STAMQ92783 540 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 MTRQ99707 1265 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 CUEDC2Q9H467 287 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 ATP1A3P13637 1013 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 TNNI2P48788 182 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 FMR1Q06787 632 aaKnown RBP eCLIP24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 SYDE2Q5VT97 1194 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 BTNL9Q6UXG8 535 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 CABP7Q86V35 215 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 POTEDQ86YR6 584 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 MTMR9Q96QG7 549 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 PCDHA1Q9Y5I3 950 aa24.53■■□□□ 1.52
PDLIM2-216ENST00000464275 GSDMDP57764 484 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 CALCRLQ16602 461 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 PPP4R3AQ6IN85 833 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 NAP1L4Q99733 375 aaKnown RBP24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 BLZF1Q9H2G9 400 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 MAGEF1Q9HAY2 307 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 RMND1Q9NWS8 449 aa24.52■■□□□ 1.52
PDLIM2-216ENST00000464275 A0A1W2PRG0 241 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 EDIL3O43854 480 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 SERPINC1P01008 464 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 MYL1P05976 194 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 CUL4BQ13620 913 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 NAALADL2Q58DX5 795 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 CACTINQ8WUQ7 758 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 NUP88Q99567 741 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 AMNQ9BXJ7 453 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 ZBTB21Q9ULJ3 1066 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 TMEM232C9JQI7 657 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 NFKBIEO00221 500 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 UBASH3AP57075 661 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 IGSF22Q8N9C0 903 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 TMEM39BQ9GZU3 492 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 MYOZ2Q9NPC6 264 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 NFE2L3Q9Y4A8 694 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 CD2APQ9Y5K6 639 aa24.51■■□□□ 1.51
PDLIM2-216ENST00000464275 WNT10BO00744 389 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 TDP2O95551 362 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 TECP42680 631 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 TMEM266Q2M3C6 531 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 MCTP2Q6DN12 878 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 FILIP1Q7Z7B0 1213 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 LRRC8AQ8IWT6 810 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 TMX2Q9Y320 296 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 PAXBP1Q9Y5B6 917 aa24.5■■□□□ 1.51
PDLIM2-216ENST00000464275 RPN1P04843 607 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 GCFC2P16383 781 aaKnown RBP24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 FXR2P51116 673 aaKnown RBP eCLIP24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 LRMPQ12912 555 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 IKQ13123 557 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 FBXO11Q86XK2 927 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 GOPCQ9HD26 462 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 PPP1R1BQ9UD71 204 aaPredicted RBP24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 PPP1R3GB7ZBB8 358 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 ZNF18P17022 549 aa24.49■■□□□ 1.51
PDLIM2-216ENST00000464275 RPS12P25398 132 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms