RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 GDF11O95390 407 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 WDR44Q5JSH3 913 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 ANKRD35Q8N283 1001 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 CEP83Q9Y592 693 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
RBM39-223ENST00000463004 KCTD2Q14681 263 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
RBM39-223ENST00000463004 FAM20AQ96MK3 541 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
RBM39-223ENST00000463004 LPAR1Q92633 364 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 NACC1Q96RE7 527 aa13.08□□□□□ -0.32
RBM39-223ENST00000463004 GOLGA6L10A0A0M3HER8 536 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 PNOCQ13519 176 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 PPP2R5AQ15172 486 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 MRPL44Q9H9J2 332 aaKnown RBP13.07□□□□□ -0.32
RBM39-223ENST00000463004 LRCH2Q5VUJ6 765 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 MTFR1LQ9H019 292 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
RBM39-223ENST00000463004 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 PLEKHA8P1O95397 391 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 EEF1GP26641 437 aaKnown RBP13.07□□□□□ -0.32
RBM39-223ENST00000463004 CCND2P30279 289 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
RBM39-223ENST00000463004 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 PTGS1P23219 599 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 RESP18Q5W5W9 173 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 GADL1Q6ZQY3 521 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 TPH2Q8IWU9 490 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 FERMT1Q9BQL6 677 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 SPC25Q9HBM1 224 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 DYNC1I1O14576 645 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 USP11P51784 963 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 SNX16P57768 344 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 EHD4Q9H223 541 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 ZNF408Q9H9D4 720 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 PCDHA5Q9Y5H7 936 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 POLRMTO00411 1230 aaKnown RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 CHMP4BP1P59074 171 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 NR5A1Q13285 461 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 CLUL1Q15846 466 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 SLC4A9Q96Q91 983 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 MRIQ9BWK5 157 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
RBM39-223ENST00000463004 HOMER2Q9NSB8 354 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
RBM39-223ENST00000463004 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 ZNF658Q5TYW1 1059 aaPredicted RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 FAM81BQ96LP2 452 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 USP17L10C9JJH3 530 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 GCNT3O95395 438 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 CHRNA5P30532 468 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 PRPF38AQ8NAV1 312 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 GIMAP8Q8ND71 665 aaPredicted RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 ZDHHC15Q96MV8 337 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 CRACR2AQ9BSW2 395 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 EPB41L4AQ9HCS5 686 aaPredicted RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■■ 29.9
RBM39-223ENST00000463004 LRRC37A3O60309 1634 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 YWHAEP62258 255 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 MORC3Q14149 939 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 TRMT1LQ7Z2T5 733 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 ZBTB8OSQ8IWT0 167 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 CLIC6Q96NY7 704 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 ZNF577Q9BSK1 485 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
RBM39-223ENST00000463004 FAM184BQ9ULE4 1060 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 ESYT2A0FGR8 921 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 F5H6K3 240 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 EXOC3O60645 756 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 BCRP11274 1271 aa13.05□□□□□ -0.32
RBM39-223ENST00000463004 U2AF2P26368 475 aaKnown RBP eCLIP13.05□□□□□ -0.322e-8■■□□□ 13.9
RBM39-223ENST00000463004 KLRC3Q07444 240 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms