RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 SLC12A7Q9Y666 1083 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 ACEP12821 1306 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 BRD4O60885 1362 aaPredicted RBP6.92□□□□□ -1.3
COPS3-204ENST00000462236 LTN1O94822 1766 aa6.92□□□□□ -1.3
COPS3-204ENST00000462236 ABCC6O95255 1503 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 TNFRSF10CO14798 259 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 IGHA1P01876 353 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 GCP02774 474 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 FBXW10Q5XX13 1052 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 LSRQ86X29 649 aaPredicted RBP6.91□□□□□ -1.3
COPS3-204ENST00000462236 FAM13CQ8NE31 585 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 ATG4CQ96DT6 458 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 PSMG3-AS1Q96PY0 264 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 KCNF1Q9H3M0 494 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 FBRSQ9HAH7 460 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 STOML1Q9UBI4 398 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
COPS3-204ENST00000462236 GSC2O15499 205 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 ITGB2P05107 769 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 NME1P15531 152 aaKnown RBP6.9□□□□□ -1.3
COPS3-204ENST00000462236 DDB1Q16531 1140 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 OVOS1Q6IE37 1185 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 CYB5D2Q8WUJ1 264 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 STK32BQ9NY57 414 aa6.9□□□□□ -1.3
COPS3-204ENST00000462236 ADCY9O60503 1353 aa6.9□□□□□ -1.31
COPS3-204ENST00000462236 TNS2Q63HR2 1409 aa6.9□□□□□ -1.31
COPS3-204ENST00000462236 NFAT5O94916 1531 aa6.9□□□□□ -1.31
COPS3-204ENST00000462236 RGS13O14921 159 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
COPS3-204ENST00000462236 NKG7Q16617 165 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 PRAMEF13Q5VWM6 474 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 ZNF746Q6NUN9 644 aaPredicted RBP6.89□□□□□ -1.31
COPS3-204ENST00000462236 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 CKAP2LQ8IYA6 745 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 C1GALT1Q9NS00 363 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 KLHL3Q9UH77 587 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 WDR17Q8IZU2 1322 aa6.89□□□□□ -1.31
COPS3-204ENST00000462236 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
COPS3-204ENST00000462236 KIF13BQ9NQT8 1826 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 RGPD2P0DJD1 1756 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 MON2Q7Z3U7 1717 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 USP6P35125 1406 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 CPSF1Q10570 1443 aaKnown RBP6.88□□□□□ -1.31
COPS3-204ENST00000462236 CHURC1-FNTBB4DL54 471 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 MSTNO14793 375 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 DNAJA2O60884 412 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 RAG1P15918 1043 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 NFKBIBQ15653 356 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.31
COPS3-204ENST00000462236 ZNF827Q17R98 1081 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 ARSHQ5FYA8 562 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 DHRS1Q96LJ7 313 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 CDK19Q9BWU1 502 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 PRDM10Q9NQV6 1147 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
COPS3-204ENST00000462236 UBR3Q6ZT12 1888 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 DOT1LQ8TEK3 1739 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 WDR90Q96KV7 1748 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 HSPA6P17066 643 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 ETFBP38117 255 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 ETV3P41162 512 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 RNF43Q68DV7 783 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 UBE3DQ7Z6J8 389 aa6.87□□□□□ -1.31
COPS3-204ENST00000462236 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
COPS3-204ENST00000462236 R3HCC1Q9Y3T6 440 aaKnown RBP6.87□□□□□ -1.31
COPS3-204ENST00000462236 FAM208AQ9UK61 1670 aaKnown RBP6.87□□□□□ -1.31
COPS3-204ENST00000462236 ATP10DQ9P241 1426 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 SBF1O95248 1867 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 UPK3BL1B0FP48 263 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 PROCP04070 461 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.316e-7■■■■□ 22.1
COPS3-204ENST00000462236 GPR162Q16538 588 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 ZAR1Q86SH2 424 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 ARHGEF25Q86VW2 580 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 PHACTR4Q8IZ21 702 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
COPS3-204ENST00000462236 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 PHAXQ9H814 394 aaKnown RBP6.86□□□□□ -1.31
COPS3-204ENST00000462236 CEP131Q9UPN4 1083 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 MRVI1Q9Y6F6 885 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 KIAA1551Q9HCM1 1747 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 C5P01031 1676 aa6.86□□□□□ -1.31
COPS3-204ENST00000462236 CICQ96RK0 1608 aaPredicted RBP6.86□□□□□ -1.31
COPS3-204ENST00000462236 PPIP5K1Q6PFW1 1433 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms