RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KCNA3P22001 575 aa22.83■■□□□ 1.24
CCM2-203ENST00000461377 BAG6P46379 1132 aa22.83■■□□□ 1.24
CCM2-203ENST00000461377 ABCB5Q2M3G0 1257 aa22.83■■□□□ 1.24
CCM2-203ENST00000461377 CDKAL1Q5VV42 579 aa22.83■■□□□ 1.24
CCM2-203ENST00000461377 LRRC15Q8TF66 581 aa22.83■■□□□ 1.24
CCM2-203ENST00000461377 GDF11O95390 407 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 SLC1A4P43007 532 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 KCNJ6P48051 423 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 STX17P56962 302 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 TPD52L1Q16890 204 aaPredicted RBP22.82■■□□□ 1.24
CCM2-203ENST00000461377 IGSF22Q8N9C0 903 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 CUL5Q93034 780 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 CTNND2Q9UQB3 1225 aa22.82■■□□□ 1.24
CCM2-203ENST00000461377 VIL1P09327 827 aaKnown RBP22.81■■□□□ 1.24
CCM2-203ENST00000461377 APTXQ7Z2E3 356 aaKnown RBP22.81■■□□□ 1.24
CCM2-203ENST00000461377 GMCL1P1Q8NEA9 526 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 MYRIPQ8NFW9 859 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 GMLQ99445 158 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 A0A1B0GTH6 734 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 SPDYE2BA6NHP3 402 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 SPDYE6P0CI01 402 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 DPEP1P16444 411 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 PLCG1P19174 1290 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 MRPL12P52815 198 aaKnown RBP22.81■■□□□ 1.24
CCM2-203ENST00000461377 TBX2Q13207 712 aaPredicted RBP22.81■■□□□ 1.24
CCM2-203ENST00000461377 SEMA3FQ13275 785 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 KCNB1Q14721 858 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 UBE2SQ16763 222 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 DEFB132Q7Z7B7 95 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 C16orf45Q96MC5 204 aaPredicted RBP22.81■■□□□ 1.24
CCM2-203ENST00000461377 RWDD2AQ9UIY3 292 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 COL4A5P29400 1685 aa22.81■■□□□ 1.24
CCM2-203ENST00000461377 USP27XA6NNY8 438 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 NRDCO43847 1150 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 TDP2O95551 362 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 TECP42680 631 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 SF3B2Q13435 895 aaKnown RBP22.8■■□□□ 1.24
CCM2-203ENST00000461377 NR1I3Q14994 352 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 CALCRLQ16602 461 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 QRICH1Q2TAL8 776 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 CCAR2Q8N163 923 aaKnown RBP22.8■■□□□ 1.24
CCM2-203ENST00000461377 LARGE2Q8N3Y3 721 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 SLC16A10Q8TF71 515 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 PSMD14O00487 310 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 SLC37A4O43826 429 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 KLRC4O43908 158 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 TNNI2P48788 182 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 FXR2P51116 673 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCM2-203ENST00000461377 CSRNP1Q96S65 589 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 PLIN2Q99541 437 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 MMTAG2Q9BU76 263 aaKnown RBP22.8■■□□□ 1.24
CCM2-203ENST00000461377 TMOD2Q9NZR1 351 aa22.8■■□□□ 1.24
CCM2-203ENST00000461377 F5H6K3 240 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 RAD17O75943 681 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 JAG1P78504 1218 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 KLRC3Q07444 240 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 PAK1Q13153 545 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 RBM26Q5T8P6 1007 aaKnown RBP22.79■■□□□ 1.24
CCM2-203ENST00000461377 PPP4R3AQ6IN85 833 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 CCDC112Q8NEF3 446 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 GMCL1Q96IK5 515 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 GLT8D2Q9H1C3 349 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 TMX1Q9H3N1 280 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 PSTPIP2Q9H939 334 aa22.79■■□□□ 1.24
CCM2-203ENST00000461377 ZNF277Q9NRM2 450 aaPredicted RBP22.79■■□□□ 1.24
CCM2-203ENST00000461377 ATF5Q9Y2D1 282 aaPredicted RBP22.79■■□□□ 1.24
CCM2-203ENST00000461377 RAD21O60216 631 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 TNNT1P13805 278 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 RRP1BQ14684 758 aaKnown RBP22.78■■□□□ 1.24
CCM2-203ENST00000461377 CDC37Q16543 378 aaPredicted RBP22.78■■□□□ 1.24
CCM2-203ENST00000461377 PTPN21Q16825 1174 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 VPS33BQ9H267 617 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 HERC5Q9UII4 1024 aaKnown RBP22.78■■□□□ 1.24
CCM2-203ENST00000461377 HDAC9Q9UKV0 1011 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 GDAQ9Y2T3 454 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 GH2P01242 217 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 TXKP42681 527 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 KMT5BQ4FZB7 885 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 SPECC1LQ69YQ0 1117 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 NYAP1Q6ZVC0 841 aa22.78■■□□□ 1.24
CCM2-203ENST00000461377 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
CCM2-203ENST00000461377 RHOBTB3O94955 611 aa22.77■■□□□ 1.24
CCM2-203ENST00000461377 NDUFB10O96000 172 aa22.77■■□□□ 1.24
CCM2-203ENST00000461377 E4F1Q66K89 784 aaPredicted RBP22.77■■□□□ 1.24
CCM2-203ENST00000461377 NELFBQ8WX92 580 aa22.77■■□□□ 1.24
CCM2-203ENST00000461377 ZNF70Q9UC06 446 aaPredicted RBP22.77■■□□□ 1.24
CCM2-203ENST00000461377 SYNPO2Q9UMS6 1093 aa22.77■■□□□ 1.24
CCM2-203ENST00000461377 TCP10L2B9ZVM9 353 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 PRCPP42785 496 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 DLGAP5Q15398 846 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 TMEM266Q2M3C6 531 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 ADSSL1Q8N142 457 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 CTAGE1Q96RT6 745 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 ADD3Q9UEY8 706 aaKnown RBP22.76■■□□□ 1.23
CCM2-203ENST00000461377 PCDHA1Q9Y5I3 950 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 PSDA5PKW4 1024 aaPredicted RBP22.76■■□□□ 1.23
CCM2-203ENST00000461377 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.231e-8■■■■■ 31.2
CCM2-203ENST00000461377 PDIA5Q14554 519 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 FAM151AQ8WW52 585 aa22.76■■□□□ 1.23
CCM2-203ENST00000461377 CALML4Q96GE6 196 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms