RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 BAATQ14032 418 aaPredicted RBP26.83■■□□□ 1.89
PTPN4-208ENST00000460289 ADD3Q9UEY8 706 aaKnown RBP26.83■■□□□ 1.89
PTPN4-208ENST00000460289 CEP290O15078 2479 aa26.83■■□□□ 1.89
PTPN4-208ENST00000460289 PTPDC1A2A3K4 754 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 NFIBO00712 420 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 NECTIN1Q15223 517 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 CDC37Q16543 378 aaPredicted RBP26.82■■□□□ 1.88
PTPN4-208ENST00000460289 CHST3Q7LGC8 479 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 MB21D2Q8IYB1 491 aaPredicted RBP26.82■■□□□ 1.88
PTPN4-208ENST00000460289 CLEC4DQ8WXI8 215 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 MTA3Q9BTC8 594 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 MAF1Q9H063 256 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 SMCHD1A6NHR9 2005 aa26.82■■□□□ 1.88
PTPN4-208ENST00000460289 SLC27A2O14975 620 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 DUSP11O75319 330 aaKnown RBP26.81■■□□□ 1.88
PTPN4-208ENST00000460289 LRRC26Q2I0M4 334 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 CCDC144BQ3MJ40 725 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 TMEM67Q5HYA8 995 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 RNF207Q6ZRF8 634 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 RGS22Q8NE09 1264 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 VAT1LQ9HCJ6 419 aa26.81■■□□□ 1.88
PTPN4-208ENST00000460289 COLQQ9Y215 455 aaPredicted RBP26.81■■□□□ 1.88
PTPN4-208ENST00000460289 LOC102724159A0A0B4J2E5 919 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 KLRF2D3W0D1 207 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 PGK1P00558 417 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 PWP2Q15269 919 aaKnown RBP26.8■■□□□ 1.88
PTPN4-208ENST00000460289 USH1GQ495M9 461 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 RNF20Q5VTR2 975 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 CREB3L3Q68CJ9 461 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 STAG2Q8N3U4 1231 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 IGDCC4Q8TDY8 1250 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 JMJD4Q9H9V9 463 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 MAD2L2Q9UI95 211 aa26.8■■□□□ 1.88
PTPN4-208ENST00000460289 PALM3A6NDB9 673 aaPredicted RBP26.79■■□□□ 1.88
PTPN4-208ENST00000460289 MCM5P33992 734 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 ADCYAP1R1P41586 468 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 HABP4Q5JVS0 413 aaKnown RBP26.79■■□□□ 1.88
PTPN4-208ENST00000460289 CHRDL2Q6WN34 429 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 CATIPQ7Z7H3 387 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 KATNBL1Q9H079 304 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 ABCB11O95342 1321 aa26.79■■□□□ 1.88
PTPN4-208ENST00000460289 CALML3P27482 149 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 ATN1P54259 1190 aaPredicted RBP26.78■■□□□ 1.88
PTPN4-208ENST00000460289 ANTXR2P58335 489 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 GRM4Q14833 912 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 QRICH1Q2TAL8 776 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 FBXO11Q86XK2 927 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 TMTC2Q8N394 836 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 MPHOSPH6Q99547 160 aaKnown RBP26.78■■□□□ 1.88
PTPN4-208ENST00000460289 SPC25Q9HBM1 224 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 PHF24Q9UPV7 400 aa26.78■■□□□ 1.88
PTPN4-208ENST00000460289 ASTN1O14525 1302 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 ADAMTS4O75173 837 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 RPS6P62753 249 aaKnown RBP26.77■■□□□ 1.88
PTPN4-208ENST00000460289 TROAPQ12815 778 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 SLC39A5Q6ZMH5 540 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 MORC4Q8TE76 937 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 LENG1Q96BZ8 264 aaPredicted RBP26.77■■□□□ 1.88
PTPN4-208ENST00000460289 PURBQ96QR8 312 aaKnown RBP26.77■■□□□ 1.88
PTPN4-208ENST00000460289 TSEN34Q9BSV6 310 aaKnown RBP26.77■■□□□ 1.88
PTPN4-208ENST00000460289 SENP2Q9HC62 589 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 ALPK3Q96L96 1907 aa26.77■■□□□ 1.88
PTPN4-208ENST00000460289 SYNRGQ9UMZ2 1314 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 PRC1O43663 620 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 ALDH5A1P51649 535 aaPredicted RBP26.76■■□□□ 1.87
PTPN4-208ENST00000460289 ERICH6BQ5W0A0 696 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 MCF2L2Q86YR7 1114 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 TMEM87BQ96K49 555 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 VTA1Q9NP79 307 aa26.76■■□□□ 1.87
PTPN4-208ENST00000460289 ZMYND8Q9ULU4 1186 aaPredicted RBP26.76■■□□□ 1.87
PTPN4-208ENST00000460289 MRPL11Q9Y3B7 192 aaKnown RBP26.76■■□□□ 1.87
PTPN4-208ENST00000460289 B4DLN1 442 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 CENPBP07199 599 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-208ENST00000460289 MRPL12P52815 198 aaKnown RBP26.75■■□□□ 1.87
PTPN4-208ENST00000460289 TNFAIP2Q03169 654 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 SLC30A10Q6XR72 485 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 DNERQ8NFT8 737 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 FERMT2Q96AC1 680 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 AMNQ9BXJ7 453 aa26.75■■□□□ 1.87
PTPN4-208ENST00000460289 ZBTB5O15062 677 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 GJA9P57773 515 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 TRAF1Q13077 416 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 C1orf53Q5VUE5 145 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 IQSEC1Q6DN90 963 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 NOL8Q76FK4 1167 aaKnown RBP26.74■■□□□ 1.87
PTPN4-208ENST00000460289 PCSK9Q8NBP7 692 aaKnown RBP26.74■■□□□ 1.87
PTPN4-208ENST00000460289 KLHDC9Q8NEP7 349 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 MTMR8Q96EF0 704 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 MAP3K14Q99558 947 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 LY9Q9HBG7 655 aa26.74■■□□□ 1.87
PTPN4-208ENST00000460289 MOXD2PA6NHM9 499 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 C6orf222P0C671 652 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-208ENST00000460289 CST5P28325 142 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-208ENST00000460289 RTP1P59025 263 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 EEPD1Q7L9B9 569 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 NUP133Q8WUM0 1156 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 UPF3AQ9H1J1 476 aaKnown RBP26.73■■□□□ 1.87
PTPN4-208ENST00000460289 RIOX1Q9H6W3 641 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 MCM3APO60318 1980 aa26.73■■□□□ 1.87
PTPN4-208ENST00000460289 ADCY6O43306 1168 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms