RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-208ENST00000460132 SLC39A5Q6ZMH5 540 aa17.1■□□□□ 0.33
PLOD3-208ENST00000460132 RNF180Q86T96 592 aa17.1■□□□□ 0.33
PLOD3-208ENST00000460132 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
PLOD3-208ENST00000460132 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
PLOD3-208ENST00000460132 PNMA2Q9UL42 364 aa17.1■□□□□ 0.33
PLOD3-208ENST00000460132 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
PLOD3-208ENST00000460132 ASB14A6NK59 587 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 ADCY6O43306 1168 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 ADAMTS4O75173 837 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 DUSP11O75319 330 aaKnown RBP17.09■□□□□ 0.33
PLOD3-208ENST00000460132 PARP1P09874 1014 aaKnown RBP17.09■□□□□ 0.33
PLOD3-208ENST00000460132 RTP1P59025 263 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 ADGRF4Q8IZF3 695 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 GDF15Q99988 308 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 PHF24Q9UPV7 400 aa17.09■□□□□ 0.33
PLOD3-208ENST00000460132 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
PLOD3-208ENST00000460132 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 SYNRGQ9UMZ2 1314 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 FXR1P51114 621 aaKnown RBP eCLIP17.08■□□□□ 0.32
PLOD3-208ENST00000460132 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 LSG1Q9H089 658 aaKnown RBP17.08■□□□□ 0.32
PLOD3-208ENST00000460132 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
PLOD3-208ENST00000460132 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
PLOD3-208ENST00000460132 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-208ENST00000460132 IRX5P78411 483 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-208ENST00000460132 SNX17Q15036 470 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 CDC37Q16543 378 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-208ENST00000460132 USH1GQ495M9 461 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
PLOD3-208ENST00000460132 STAG2Q8N3U4 1231 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 KLHDC9Q8NEP7 349 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 ATP11BQ9Y2G3 1177 aa17.07■□□□□ 0.32
PLOD3-208ENST00000460132 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-208ENST00000460132 A0A1W2PQ45 241 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-208ENST00000460132 A0A1W2PQY0 241 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 MYADML2A6NDP7 307 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 CALML3P27482 149 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 ACLYP53396 1101 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 TNFAIP2Q03169 654 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 KCNA10Q16322 511 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 TRIM60Q495X7 471 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 CCSAPQ6IQ19 270 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-208ENST00000460132 SLC30A10Q6XR72 485 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 RNF207Q6ZRF8 634 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 EEPD1Q7L9B9 569 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 TSEN34Q9BSV6 310 aaKnown RBP17.06■□□□□ 0.32
PLOD3-208ENST00000460132 JMJD4Q9H9V9 463 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 PDGFCQ9NRA1 345 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 MCM3APO60318 1980 aa17.06■□□□□ 0.32
PLOD3-208ENST00000460132 ERICH2A1L162 156 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 C6orf222P0C671 652 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 BMP8BP34820 402 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 ALDH5A1P51649 535 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 GJA9P57773 515 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 ANTXR2P58335 489 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 TAPT1Q6NXT6 567 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 FBXO16Q8IX29 292 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 CCDC136Q96JN2 1154 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 UPF3AQ9H1J1 476 aaKnown RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
PLOD3-208ENST00000460132 MAD2L2Q9UI95 211 aa17.05■□□□□ 0.32
PLOD3-208ENST00000460132 CST5P28325 142 aaPredicted RBP17.04■□□□□ 0.32
PLOD3-208ENST00000460132 WTAPQ15007 396 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
PLOD3-208ENST00000460132 TMEM67Q5HYA8 995 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 NOL8Q76FK4 1167 aaKnown RBP17.04■□□□□ 0.32
PLOD3-208ENST00000460132 RGS22Q8NE09 1264 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 SPC25Q9HBM1 224 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
PLOD3-208ENST00000460132 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
PLOD3-208ENST00000460132 ABCB11O95342 1321 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 A0A1W2PPC1 479 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 MOXD2PA6NHM9 499 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 SLC27A2O14975 620 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 CTAGE5O15320 804 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 SMPD1P17405 629 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 PTGS1P23219 599 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
PLOD3-208ENST00000460132 TLE2Q04725 743 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 GRM4Q14833 912 aa17.03■□□□□ 0.32
PLOD3-208ENST00000460132 NECTIN1Q15223 517 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms