RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 RALYLQ86SE5 291 aaKnown RBP18.22■□□□□ 0.51
SDF4-204ENST00000459994 MB21D2Q8IYB1 491 aaPredicted RBP18.22■□□□□ 0.51
SDF4-204ENST00000459994 ESR2Q92731 530 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
SDF4-204ENST00000459994 ZSWIM6Q9HCJ5 1215 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 XPNPEP3Q9NQH7 507 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 SYNGAP1Q96PV0 1343 aa18.22■□□□□ 0.51
SDF4-204ENST00000459994 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 SOWAHBA6NEL2 793 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 B4E1Z4 1266 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 KBTBD13C9JR72 458 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 PDHBP11177 359 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 TOP1P11387 765 aaKnown RBP18.21■□□□□ 0.51
SDF4-204ENST00000459994 PTGS1P23219 599 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 MDM2Q00987 491 aaPredicted RBP18.21■□□□□ 0.51
SDF4-204ENST00000459994 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 ARRDC4Q8NCT1 418 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 TRERF1Q96PN7 1200 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 KATNBL1Q9H079 304 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 ACAD9Q9H845 621 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.21■□□□□ 0.51
SDF4-204ENST00000459994 NRBP1Q9UHY1 535 aa18.21■□□□□ 0.51
SDF4-204ENST00000459994 ZHX1Q9UKY1 873 aaPredicted RBP18.21■□□□□ 0.51
SDF4-204ENST00000459994 KDM4AO75164 1064 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 ADAMTS4O75173 837 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 RARBP10826 455 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 AKR1A1P14550 325 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
SDF4-204ENST00000459994 BMP8BP34820 402 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 RABEP1Q15276 862 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 TRIM60Q495X7 471 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 PPP4R3BQ5MIZ7 849 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 BTNL9Q6UXG8 535 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 ARMCX2Q7L311 632 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
SDF4-204ENST00000459994 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 MTA3Q9BTC8 594 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 RANBP17Q9H2T7 1088 aaKnown RBP18.2■□□□□ 0.5
SDF4-204ENST00000459994 ZSWIM5Q9P217 1185 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 ATP11BQ9Y2G3 1177 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 SYNRGQ9UMZ2 1314 aa18.2■□□□□ 0.5
SDF4-204ENST00000459994 FDX1P10109 184 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 MCM5P33992 734 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
SDF4-204ENST00000459994 SYDE2Q5VT97 1194 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 RUFY3Q7L099 469 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 ZNF467Q7Z7K2 595 aaPredicted RBP18.19■□□□□ 0.5
SDF4-204ENST00000459994 PHF24Q9UPV7 400 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 CNPY2Q9Y2B0 182 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 CYP46A1Q9Y6A2 500 aa18.19■□□□□ 0.5
SDF4-204ENST00000459994 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
SDF4-204ENST00000459994 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 SNHG28P0DPA3 235 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 SNX17Q15036 470 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 CYB5R4Q7L1T6 521 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 SH3RF1Q7Z6J0 888 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
SDF4-204ENST00000459994 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
SDF4-204ENST00000459994 A0A1W2PQ45 241 aaPredicted RBP18.17■□□□□ 0.5
SDF4-204ENST00000459994 A0A1W2PQY0 241 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 POTEB2H3BUK9 544 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 NFIBO00712 420 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 ICAM1P05362 532 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 ANTXR2P58335 489 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 ZNF543Q08ER8 600 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 COL9A3Q14050 684 aaPredicted RBP18.17■□□□□ 0.5
SDF4-204ENST00000459994 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 CCDC178Q5BJE1 867 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
SDF4-204ENST00000459994 ALDH8A1Q9H2A2 487 aaPredicted RBP18.17■□□□□ 0.5
SDF4-204ENST00000459994 CYP39A1Q9NYL5 469 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 FAM184BQ9ULE4 1060 aa18.17■□□□□ 0.5
SDF4-204ENST00000459994 A0A1W2PPC1 479 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 PRC1O43663 620 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 TKFCQ3LXA3 575 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 CCSAPQ6IQ19 270 aaPredicted RBP18.16■□□□□ 0.5
SDF4-204ENST00000459994 NSMFQ6X4W1 530 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 KLHDC9Q8NEP7 349 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 TMEM87BQ96K49 555 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 TTC14Q96N46 770 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 UBE2OQ9C0C9 1292 aaKnown RBP18.16■□□□□ 0.5
SDF4-204ENST00000459994 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
SDF4-204ENST00000459994 TRIM43BA6NCK2 446 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 CTAGE5O15320 804 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 CPA1P15085 419 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 ITGB8P26012 769 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 NEK4P51957 841 aa18.15■□□□□ 0.5
SDF4-204ENST00000459994 ENAHQ8N8S7 591 aaPredicted RBP18.15■□□□□ 0.5
SDF4-204ENST00000459994 CLEC4DQ8WXI8 215 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms