RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TRPV1Q8NER1 839 aa23.24■■□□□ 1.31
COL9A3-202ENST00000452372 JAKMIP1Q96N16 626 aaKnown RBP23.24■■□□□ 1.31
COL9A3-202ENST00000452372 PNMA2Q9UL42 364 aa23.24■■□□□ 1.31
COL9A3-202ENST00000452372 CCPG1Q9ULG6 757 aa23.24■■□□□ 1.31
COL9A3-202ENST00000452372 DDAH1O94760 285 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 ALAS1P13196 640 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 PSMA5P28066 241 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 TRERF1Q96PN7 1200 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 ACAD9Q9H845 621 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 HOMER2Q9NSB8 354 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
COL9A3-202ENST00000452372 FRMPD3Q5JV73 1810 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 CYP2C19P33261 490 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 MFSD14CQ5VZR4 134 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 BLOC1S2Q6QNY1 142 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 C7orf61Q8IZ16 206 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 NUP133Q8WUM0 1156 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 TCEANC2Q96MN5 208 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 JMJD4Q9H9V9 463 aa23.22■■□□□ 1.31
COL9A3-202ENST00000452372 PGK2P07205 417 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 ZNF792Q3KQV3 632 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 ANKRD35Q8N283 1001 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 DDX11Q96FC9 970 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 GDF15Q99988 308 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 VAT1LQ9HCJ6 419 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 DIS3Q9Y2L1 958 aaKnown RBP23.21■■□□□ 1.31
COL9A3-202ENST00000452372 SLC12A7Q9Y666 1083 aa23.21■■□□□ 1.31
COL9A3-202ENST00000452372 BAZ2BQ9UIF8 2168 aaKnown RBP23.2■■□□□ 1.3
COL9A3-202ENST00000452372 DNAJC25-GNG10A0A024R161 153 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 DHX16O60231 1041 aaKnown RBP23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CALM1P0DP23 149 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CALM2P0DP24 149 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CALM3P0DP25 149 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CPA1P15085 419 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
COL9A3-202ENST00000452372 OLFML2BQ68BL8 750 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 CTCFLQ8NI51 663 aaPredicted RBP23.2■■□□□ 1.3
COL9A3-202ENST00000452372 MAML3Q96JK9 1138 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 MYL10Q9BUA6 226 aa23.2■■□□□ 1.3
COL9A3-202ENST00000452372 ZMYND8Q9ULU4 1186 aaPredicted RBP23.2■■□□□ 1.3
COL9A3-202ENST00000452372 PLXNA1Q9UIW2 1896 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 RPS6KB1P23443 525 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 KIF5BP33176 963 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 MUM1L1Q5H9M0 696 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 FBXL16Q8N461 479 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 MTMR8Q96EF0 704 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 TM6SF1Q9BZW5 370 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 RIOX1Q9H6W3 641 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 DDX20Q9UHI6 824 aaKnown RBP23.19■■□□□ 1.3
COL9A3-202ENST00000452372 MYH6P13533 1939 aa23.19■■□□□ 1.3
COL9A3-202ENST00000452372 CYBAP13498 195 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 TAL1P17542 331 aaPredicted RBP23.18■■□□□ 1.3
COL9A3-202ENST00000452372 CASTP20810 708 aaKnown RBP23.18■■□□□ 1.3
COL9A3-202ENST00000452372 LRRC26Q2I0M4 334 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 SLC35G1Q2M3R5 365 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 SYNE3Q6ZMZ3 975 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 ZSWIM6Q9HCJ5 1215 aa23.18■■□□□ 1.3
COL9A3-202ENST00000452372 A1CFQ9NQ94 594 aaKnown RBP23.18■■□□□ 1.3
COL9A3-202ENST00000452372 A0A1W2PPC1 479 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 CYTH3O43739 400 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 SEC24BO95487 1268 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 SMARCA1P28370 1054 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 BMP8BP34820 402 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 GNAQP50148 359 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 FGD1P98174 961 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 Q6ZUG5 572 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 FANCBQ8NB91 859 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 LZTS2Q9BRK4 669 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
COL9A3-202ENST00000452372 SOX1O00570 391 aaPredicted RBP23.16■■□□□ 1.3
COL9A3-202ENST00000452372 SYN1P17600 705 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 RXRAP19793 462 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 ANAPC15P60006 121 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 C8orf34Q49A92 452 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 APOA5Q6Q788 366 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 RUFY3Q7L099 469 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 CLEC4DQ8WXI8 215 aa23.16■■□□□ 1.3
COL9A3-202ENST00000452372 ZBTB5O15062 677 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 CNGA1P29973 690 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 USH1GQ495M9 461 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 PRAMEF19Q5SWL8 479 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 FAM133AQ8N9E0 248 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 TINF2Q9BSI4 451 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 AGXT2Q9BYV1 514 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 CYP39A1Q9NYL5 469 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 CYP46A1Q9Y6A2 500 aa23.15■■□□□ 1.3
COL9A3-202ENST00000452372 ABCB11O95342 1321 aa23.14■■□□□ 1.3
COL9A3-202ENST00000452372 POTEB2H3BUK9 544 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 NFIBO00712 420 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 NSMFQ6X4W1 530 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 ZNF467Q7Z7K2 595 aaPredicted RBP23.14■■□□□ 1.29
COL9A3-202ENST00000452372 MICU3Q86XE3 530 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 RAB11FIP4Q86YS3 637 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 CCDC144CPQ8IYA2 1237 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 MSL3Q8N5Y2 521 aaKnown RBP23.14■■□□□ 1.29
COL9A3-202ENST00000452372 PIGSQ96S52 555 aa23.14■■□□□ 1.29
COL9A3-202ENST00000452372 SPZ1Q9BXG8 430 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms