RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 MYADML2A6NDP7 307 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 SNHG28P0DPA3 235 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 PTGS1P23219 599 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 CALML3P27482 149 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 BAATQ14032 418 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 GPATCH4Q5T3I0 446 aaKnown RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 MAMDC4Q6UXC1 1216 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP54-207ENST00000451492 CENPQQ7L2Z9 268 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 RNF180Q86T96 592 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 FAM133AQ8N9E0 248 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 NRBP1Q9UHY1 535 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 RANBP2P49792 3224 aaKnown RBP11.33□□□□□ -0.6
USP54-207ENST00000451492 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
USP54-207ENST00000451492 A0A1W2PQ45 241 aaPredicted RBP11.32□□□□□ -0.6
USP54-207ENST00000451492 A0A1W2PQY0 241 aa11.32□□□□□ -0.6
USP54-207ENST00000451492 E7EWF7 191 aa11.32□□□□□ -0.6
USP54-207ENST00000451492 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
USP54-207ENST00000451492 C6orf222P0C671 652 aaPredicted RBP11.32□□□□□ -0.6
USP54-207ENST00000451492 FXR1P51114 621 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP54-207ENST00000451492 SLC39A5Q6ZMH5 540 aa11.32□□□□□ -0.6
USP54-207ENST00000451492 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
USP54-207ENST00000451492 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
USP54-207ENST00000451492 ABHD16BQ9H3Z7 469 aa11.32□□□□□ -0.6
USP54-207ENST00000451492 ERICH2A1L162 156 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 ASB14A6NK59 587 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
USP54-207ENST00000451492 ADAMTS4O75173 837 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 ALDH5A1P51649 535 aaPredicted RBP11.31□□□□□ -0.6
USP54-207ENST00000451492 BEX3Q00994 111 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 KIAA1211Q6ZU35 1233 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 STAG2Q8N3U4 1231 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 NCOA7Q8NI08 942 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 UBE2OQ9C0C9 1292 aaKnown RBP11.31□□□□□ -0.6
USP54-207ENST00000451492 SENP2Q9HC62 589 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 PRKAG2Q9UGJ0 569 aa11.31□□□□□ -0.6
USP54-207ENST00000451492 BAZ2BQ9UIF8 2168 aaKnown RBP11.31□□□□□ -0.6
USP54-207ENST00000451492 SZT2Q5T011 3432 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 PQBP1O60828 265 aaKnown RBP11.3□□□□□ -0.6
USP54-207ENST00000451492 TNFAIP2Q03169 654 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 WTAPQ15007 396 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 SEC23AQ15436 765 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 KCNA10Q16322 511 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 CLEC4DQ8WXI8 215 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 VTI1AQ96AJ9 217 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 KATNBL1Q9H079 304 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
USP54-207ENST00000451492 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 ASGR1P07306 291 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 NT5C2P49902 561 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 ACLYP53396 1101 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 ANTXR2P58335 489 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 RPS6P62753 249 aaKnown RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 SART3Q15020 963 aaKnown RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 TMEM67Q5HYA8 995 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 MAP4K1Q92918 833 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 GDF15Q99988 308 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 LBHD1Q9BQE6 289 aaPredicted RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 LSG1Q9H089 658 aaKnown RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 PDLIM7Q9NR12 457 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 LAMA2P24043 3122 aaKnown RBP11.29□□□□□ -0.6
USP54-207ENST00000451492 DOCK5Q9H7D0 1870 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
USP54-207ENST00000451492 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
USP54-207ENST00000451492 NEFLP07196 543 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 SMPD1P17405 629 aa11.28□□□□□ -0.6
USP54-207ENST00000451492 PDE4DQ08499 809 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms