RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 MICU3Q86XE3 530 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 FBXL16Q8N461 479 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 FANCBQ8NB91 859 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 MTMR8Q96EF0 704 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 MAML3Q96JK9 1138 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 RNF208Q9H0X6 261 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
COPS7B-215ENST00000450501 FLRT1Q9NZU1 646 aa21.82■■□□□ 1.08
COPS7B-215ENST00000450501 DNAJC25-GNG10A0A024R161 153 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 KLF18A0A0U1RQI7 1052 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 ZBTB5O15062 677 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 ZBTB43O43298 467 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 SEC24BO95487 1268 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 PRKAR2AP13861 404 aaKnown RBP21.81■■□□□ 1.08
COPS7B-215ENST00000450501 RXRAP19793 462 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 SMARCA1P28370 1054 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 TRIM32Q13049 653 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 USH1GQ495M9 461 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 FBXO11Q86XK2 927 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 SPZ1Q9BXG8 430 aa21.81■■□□□ 1.08
COPS7B-215ENST00000450501 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 TAL1P17542 331 aaPredicted RBP21.8■■□□□ 1.08
COPS7B-215ENST00000450501 RCAN1P53805 252 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 SOX10P56693 466 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 CACNB2Q08289 660 aaPredicted RBP21.8■■□□□ 1.08
COPS7B-215ENST00000450501 TRAF1Q13077 416 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 MAP3K21Q5TCX8 1036 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 NSMFQ6X4W1 530 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 RAB11FIP4Q86YS3 637 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 CCDC144CPQ8IYA2 1237 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 BRF1Q92994 677 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 AMNQ9BXJ7 453 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 AGXT2Q9BYV1 514 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 UNC93B1Q9H1C4 597 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 HMX1Q9NP08 348 aaPredicted RBP21.8■■□□□ 1.08
COPS7B-215ENST00000450501 BRPF3Q9ULD4 1205 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 ABCB11O95342 1321 aa21.8■■□□□ 1.08
COPS7B-215ENST00000450501 POTEB2H3BUK9 544 aa21.79■■□□□ 1.08
COPS7B-215ENST00000450501 CYTH3O43739 400 aa21.79■■□□□ 1.08
COPS7B-215ENST00000450501 SLC35G1Q2M3R5 365 aa21.79■■□□□ 1.08
COPS7B-215ENST00000450501 HOMER1Q86YM7 354 aa21.79■■□□□ 1.08
COPS7B-215ENST00000450501 RBM28Q9NW13 759 aaKnown RBP21.79■■□□□ 1.08
COPS7B-215ENST00000450501 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
COPS7B-215ENST00000450501 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
COPS7B-215ENST00000450501 NFIBO00712 420 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 IGHA2P01877 340 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 CYP2C19P33261 490 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 ZNF467Q7Z7K2 595 aaPredicted RBP21.78■■□□□ 1.08
COPS7B-215ENST00000450501 MSL3Q8N5Y2 521 aaKnown RBP21.78■■□□□ 1.08
COPS7B-215ENST00000450501 CLEC4DQ8WXI8 215 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 PIGSQ96S52 555 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 TINF2Q9BSI4 451 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 UPF3BQ9BZI7 483 aaKnown RBP21.78■■□□□ 1.08
COPS7B-215ENST00000450501 MAF1Q9H063 256 aa21.78■■□□□ 1.08
COPS7B-215ENST00000450501 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.78■■□□□ 1.08
COPS7B-215ENST00000450501 MRPL11Q9Y3B7 192 aaKnown RBP21.78■■□□□ 1.08
COPS7B-215ENST00000450501 PNMA6FA0A0J9YX94 578 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 GOLGA8BA8MQT2 603 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 PLEKHA8P1O95397 391 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 GJB1P08034 283 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 PPP2R5BQ15173 497 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 RTN1Q16799 776 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 TMTC3Q6ZXV5 915 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 SRBD1Q8N5C6 995 aaKnown RBP21.77■■□□□ 1.08
COPS7B-215ENST00000450501 FAM133AQ8N9E0 248 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 RRP36Q96EU6 259 aaKnown RBP21.77■■□□□ 1.08
COPS7B-215ENST00000450501 IL17RAQ96F46 866 aa21.77■■□□□ 1.08
COPS7B-215ENST00000450501 PAK6Q9NQU5 681 aaPredicted RBP21.77■■□□□ 1.08
COPS7B-215ENST00000450501 PTPDC1A2A3K4 754 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 POTEFA5A3E0 1075 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 CNTN2Q02246 1040 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 BAATQ14032 418 aaPredicted RBP21.76■■□□□ 1.07
COPS7B-215ENST00000450501 RNF207Q6ZRF8 634 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 MCF2L2Q86YR7 1114 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 RGS22Q8NE09 1264 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 PDRG1Q9NUG6 133 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
COPS7B-215ENST00000450501 PCDHA1Q9Y5I3 950 aa21.76■■□□□ 1.07
COPS7B-215ENST00000450501 CCDC196A0A1B0GTZ2 297 aa21.75■■□□□ 1.07
COPS7B-215ENST00000450501 METAP2P50579 478 aaKnown RBP eCLIP21.75■■□□□ 1.07
COPS7B-215ENST00000450501 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
COPS7B-215ENST00000450501 PIBF1Q8WXW3 757 aa21.75■■□□□ 1.07
COPS7B-215ENST00000450501 NRBP1Q9UHY1 535 aa21.75■■□□□ 1.07
COPS7B-215ENST00000450501 SYNGAP1Q96PV0 1343 aa21.75■■□□□ 1.07
COPS7B-215ENST00000450501 MCM3APO60318 1980 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 PPP1R11O60927 126 aaPredicted RBP21.74■■□□□ 1.07
COPS7B-215ENST00000450501 CYBAP13498 195 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 CAPN2P17655 700 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 GJA8P48165 433 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 EVCP57679 992 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 TOB2Q14106 344 aaPredicted RBP21.74■■□□□ 1.07
COPS7B-215ENST00000450501 CMTR1Q8N1G2 835 aaKnown RBP21.74■■□□□ 1.07
COPS7B-215ENST00000450501 DEFB118Q96PH6 123 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 ADD3Q9UEY8 706 aaKnown RBP21.74■■□□□ 1.07
COPS7B-215ENST00000450501 CNPY2Q9Y2B0 182 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 LCTP09848 1927 aa21.74■■□□□ 1.07
COPS7B-215ENST00000450501 ASB14A6NK59 587 aa21.73■■□□□ 1.07
COPS7B-215ENST00000450501 SGPL1O95470 568 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms