RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ATAD3AQ9NVI7 634 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NDE1Q9NXR1 346 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ZRANB1Q9UGI0 708 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 DBNLQ9UJU6 430 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 SAMM50Q9Y512 469 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CD2APQ9Y5K6 639 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SESN1Q9Y6P5 492 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PLCH2O75038 1416 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NLRP1Q9C000 1473 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FRMPD1Q5SYB0 1578 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TMEM110-MUSTN1A8MSY1 372 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SURF6O75683 361 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ATP4AP20648 1035 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ERCC5P28715 1186 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 TMPOP42166 694 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ECE1P42892 770 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PLCD1P51178 756 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PDE1AP54750 535 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 AK2P54819 239 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MTTPP55157 894 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SKOR1P84550 965 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TFAP4Q01664 338 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ADALQ6DHV7 355 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ANO5Q75V66 913 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 BZW1Q7L1Q6 419 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 TMEM110Q86TL2 294 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PLEKHM2Q8IWE5 1019 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PEX5LQ8IYB4 626 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TMCO5AQ8N6Q1 288 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 COG3Q96JB2 828 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SERPINI1Q99574 410 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 LZTS2Q9BRK4 669 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 DDX23Q9BUQ8 820 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 CAAP1Q9H8G2 361 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SLC38A10Q9HBR0 1119 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KCNK9Q9NPC2 374 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HAUS2Q9NVX0 235 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SYNPO2Q9UMS6 1093 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CDHR2Q9BYE9 1310 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ATP10AO60312 1499 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FANCAO15360 1455 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KDRP35968 1356 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ADGRA3Q8IWK6 1321 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ADCY3O60266 1144 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 GADD45BO75293 160 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 S100BP04271 92 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 EPB41P11171 864 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 LMOD1P29536 600 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 RGS2P41220 211 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CLCN2P51788 898 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RAD23BP54727 409 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 STX17P56962 302 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NUP107P57740 925 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 UBXN1Q04323 297 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 LRMPQ12912 555 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RIPK1Q13546 671 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SNX1Q13596 522 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ITGA9Q13797 1035 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TRIM60Q495X7 471 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 THOC7Q6I9Y2 204 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 TUBA3EQ6PEY2 450 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 POTEEQ6S8J3 1075 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 STXBP4Q6ZWJ1 553 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PATL1Q86TB9 770 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 LRRC49Q8IUZ0 686 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KIAA0825Q8IV33 1275 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MYOCDQ8IZQ8 938 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MAB21L3Q8N8X9 362 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CEP70Q8NHQ1 597 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RASSF5Q8WWW0 418 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SSH1Q8WYL5 1049 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 EZH1Q92800 747 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 DHX58Q96C10 678 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 EFHD1Q9BUP0 239 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KCNF1Q9H3M0 494 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 STRN4Q9NRL3 753 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 USP40Q9NVE5 1235 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KIAA1468Q9P260 1216 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 DSEQ9UL01 958 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RICTORQ6R327 1708 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TROQ12816 1431 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ARHGEF10O15013 1369 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ABCC12Q96J65 1359 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SBNO2Q9Y2G9 1366 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CCDC188H7C350 402 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TXNDC9O14530 226 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 WDR46O15213 610 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 IDH3BO43837 385 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TBC1D8O95759 1140 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PENKP01210 267 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ATP5BP06576 529 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ALOX5P09917 674 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 GGCXP38435 758 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MATR3P43243 847 aaKnown RBP eCLIP2.41□□□□□ -2.02
USP53-202ENST00000450251 SERPINB4P48594 390 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 AP1B1Q10567 949 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 STK3Q13188 491 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RCN1Q15293 331 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PTGISQ16647 500 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms