RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 MOXD2PA6NHM9 499 aa20.35■□□□□ 0.85
CLTCL1-203ENST00000449918 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
CLTCL1-203ENST00000449918 KLHDC9Q8NEP7 349 aa20.35■□□□□ 0.85
CLTCL1-203ENST00000449918 SMCHD1A6NHR9 2005 aa20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 C6orf222P0C671 652 aaPredicted RBP20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 ACLYP53396 1101 aa20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 KCNA10Q16322 511 aa20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 PCSK9Q8NBP7 692 aaKnown RBP20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 KATNBL1Q9H079 304 aa20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 PRDM5Q9NQX1 630 aaPredicted RBP20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 ADD3Q9UEY8 706 aaKnown RBP20.34■□□□□ 0.85
CLTCL1-203ENST00000449918 CHMLP26374 656 aa20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 CST5P28325 142 aaPredicted RBP20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 TNFAIP2Q03169 654 aa20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 BAATQ14032 418 aaPredicted RBP20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 LRIT3Q3SXY7 679 aa20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 NOL8Q76FK4 1167 aaKnown RBP20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 ENAHQ8N8S7 591 aaPredicted RBP20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 IL25Q9H293 177 aa20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 STARD7Q9NQZ5 370 aa20.33■□□□□ 0.85
CLTCL1-203ENST00000449918 WDR19Q8NEZ3 1342 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 PTPDC1A2A3K4 754 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 GOLGA8HP0CJ92 632 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 GJA9P57773 515 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 TLE2Q04725 743 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 TRDNQ13061 729 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 GNASQ5JWF2 1037 aa20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 CCSAPQ6IQ19 270 aaPredicted RBP20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 U3KPZ7 1027 aaPredicted RBP20.32■□□□□ 0.84
CLTCL1-203ENST00000449918 TNKSO95271 1327 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 LOC102724159A0A0B4J2E5 919 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 SOX1O00570 391 aaPredicted RBP20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 NFIBO00712 420 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 PWP2Q15269 919 aaKnown RBP20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 ASPRV1Q53RT3 343 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 IQSEC1Q6DN90 963 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 GLT1D1Q96MS3 346 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 UBA5Q9GZZ9 404 aa20.31■□□□□ 0.84
CLTCL1-203ENST00000449918 ELP1O95163 1332 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 ADCY6O43306 1168 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 PARP1P09874 1014 aaKnown RBP20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 NKX3-2P78367 333 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 GPR153Q6NV75 609 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 RNF207Q6ZRF8 634 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 MORC4Q8TE76 937 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 CLEC4DQ8WXI8 215 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 VTI1AQ96AJ9 217 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 MPHOSPH6Q99547 160 aaKnown RBP20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 VTA1Q9NP79 307 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 PDLIM7Q9NR12 457 aa20.3■□□□□ 0.84
CLTCL1-203ENST00000449918 ASTN1O14525 1302 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 MYADML2A6NDP7 307 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 DCDC2CA8MYV0 355 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 PQBP1O60828 265 aaKnown RBP20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 ASGR1P07306 291 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 CLTBP09497 229 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 CALML3P27482 149 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 EEPD1Q7L9B9 569 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 ANKRD33Q7Z3H0 272 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 LRCH3Q96II8 777 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 TOX2Q96NM4 488 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 PURBQ96QR8 312 aaKnown RBP20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 AP5M1Q9H0R1 490 aa20.29■□□□□ 0.84
CLTCL1-203ENST00000449918 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 ALDH5A1P51649 535 aaPredicted RBP20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 PTH1RQ03431 593 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 CDC37Q16543 378 aaPredicted RBP20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 SH3RF1Q7Z6J0 888 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 ADGRF4Q8IZF3 695 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 RGS22Q8NE09 1264 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 BADQ92934 168 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 MAF1Q9H063 256 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 GNEQ9Y223 722 aaKnown RBP20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 Q9Y3F1 56 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 DNAH12Q6ZR08 3092 aa20.28■□□□□ 0.84
CLTCL1-203ENST00000449918 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 LAMA4Q16363 1823 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 TRIM43BA6NCK2 446 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 B4DLN1 442 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 SGSM2O43147 1006 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 ZEB2O60315 1214 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 SMPD1P17405 629 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 MRPL12P52815 198 aaKnown RBP20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 USH1GQ495M9 461 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 TAPT1Q6NXT6 567 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 KIAA1211Q6ZU35 1233 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 TLK2Q86UE8 772 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 FBXO16Q8IX29 292 aaPredicted RBP20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 DNERQ8NFT8 737 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 TRIM43Q96BQ3 446 aaPredicted RBP20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 CPVLQ9H3G5 476 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 PDGFCQ9NRA1 345 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 TMEM39AQ9NV64 488 aa20.27■□□□□ 0.84
CLTCL1-203ENST00000449918 KIAA0355O15063 1070 aa20.26■□□□□ 0.83
CLTCL1-203ENST00000449918 CTAGE5O15320 804 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms