RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LBHD1Q9BQE6 289 aaPredicted RBP20.75■□□□□ 0.91
DDX56-207ENST00000448192 TNKSO95271 1327 aa20.75■□□□□ 0.91
DDX56-207ENST00000448192 A0A1W2PQ45 241 aaPredicted RBP20.74■□□□□ 0.91
DDX56-207ENST00000448192 A0A1W2PQY0 241 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 LRRC37A2A6NM11 1700 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 NFIBO00712 420 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 ADCY6O43306 1168 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
DDX56-207ENST00000448192 SNX17Q15036 470 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 ANKS1AQ92625 1134 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 PURBQ96QR8 312 aaKnown RBP20.74■□□□□ 0.91
DDX56-207ENST00000448192 UBAC1Q9BSL1 405 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 KATNBL1Q9H079 304 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 CPVLQ9H3G5 476 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 PRDM5Q9NQX1 630 aaPredicted RBP20.74■□□□□ 0.91
DDX56-207ENST00000448192 DDX49Q9Y6V7 483 aaKnown RBP20.74■□□□□ 0.91
DDX56-207ENST00000448192 MYH6P13533 1939 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 ASTN1O14525 1302 aa20.74■□□□□ 0.91
DDX56-207ENST00000448192 PTPDC1A2A3K4 754 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
DDX56-207ENST00000448192 ACLYP53396 1101 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 IRX5P78411 483 aaPredicted RBP20.73■□□□□ 0.91
DDX56-207ENST00000448192 PTH1RQ03431 593 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 KCNA10Q16322 511 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 NOL8Q76FK4 1167 aaKnown RBP20.73■□□□□ 0.91
DDX56-207ENST00000448192 TDHQ8IZJ6 230 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 KLHDC9Q8NEP7 349 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 TSEN34Q9BSV6 310 aaKnown RBP20.73■□□□□ 0.91
DDX56-207ENST00000448192 SPC25Q9HBM1 224 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 PNMA2Q9UL42 364 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 LTBP2Q14767 1821 aa20.73■□□□□ 0.91
DDX56-207ENST00000448192 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
DDX56-207ENST00000448192 SOX1O00570 391 aaPredicted RBP20.72■□□□□ 0.91
DDX56-207ENST00000448192 TNFAIP2Q03169 654 aa20.72■□□□□ 0.91
DDX56-207ENST00000448192 TLE2Q04725 743 aa20.72■□□□□ 0.91
DDX56-207ENST00000448192 TRDNQ13061 729 aa20.72■□□□□ 0.91
DDX56-207ENST00000448192 C1orf53Q5VUE5 145 aa20.72■□□□□ 0.91
DDX56-207ENST00000448192 LAMA3Q16787 3333 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.71■□□□□ 0.91
DDX56-207ENST00000448192 MOXD2PA6NHM9 499 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 CALML3P27482 149 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 USH1GQ495M9 461 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
DDX56-207ENST00000448192 EEPD1Q7L9B9 569 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 NUP133Q8WUM0 1156 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 CLEC4DQ8WXI8 215 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 STARD7Q9NQZ5 370 aa20.71■□□□□ 0.91
DDX56-207ENST00000448192 ADD3Q9UEY8 706 aaKnown RBP20.71■□□□□ 0.91
DDX56-207ENST00000448192 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
DDX56-207ENST00000448192 SGSM2O43147 1006 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 DHX16O60231 1041 aaKnown RBP20.7■□□□□ 0.9
DDX56-207ENST00000448192 CYP21A2P08686 494 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.9
DDX56-207ENST00000448192 GJA9P57773 515 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 ASPRV1Q53RT3 343 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 SLC30A10Q6XR72 485 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 RNF207Q6ZRF8 634 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 CYB5R4Q7L1T6 521 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 FBXO16Q8IX29 292 aaPredicted RBP20.7■□□□□ 0.9
DDX56-207ENST00000448192 PCSK9Q8NBP7 692 aaKnown RBP20.7■□□□□ 0.9
DDX56-207ENST00000448192 LRCH3Q96II8 777 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 UPF3AQ9H1J1 476 aaKnown RBP20.7■□□□□ 0.9
DDX56-207ENST00000448192 PDLIM7Q9NR12 457 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 WDR19Q8NEZ3 1342 aa20.7■□□□□ 0.9
DDX56-207ENST00000448192 PQBP1O60828 265 aaKnown RBP20.69■□□□□ 0.9
DDX56-207ENST00000448192 ASGR1P07306 291 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 CST5P28325 142 aaPredicted RBP20.69■□□□□ 0.9
DDX56-207ENST00000448192 CDC37Q16543 378 aaPredicted RBP20.69■□□□□ 0.9
DDX56-207ENST00000448192 CCSAPQ6IQ19 270 aaPredicted RBP20.69■□□□□ 0.9
DDX56-207ENST00000448192 SH3RF1Q7Z6J0 888 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 ADGRF4Q8IZF3 695 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 VTI1AQ96AJ9 217 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 GLT1D1Q96MS3 346 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
DDX56-207ENST00000448192 ALDH5A1P51649 535 aaPredicted RBP20.68■□□□□ 0.9
DDX56-207ENST00000448192 TRIM43BA6NCK2 446 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 CLTBP09497 229 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 RPS6P62753 249 aaKnown RBP20.67■□□□□ 0.9
DDX56-207ENST00000448192 BEX3Q00994 111 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 SEC23AQ15436 765 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 IQSEC1Q6DN90 963 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 TAPT1Q6NXT6 567 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 RALYLQ86SE5 291 aaKnown RBP20.67■□□□□ 0.9
DDX56-207ENST00000448192 TLK2Q86UE8 772 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 BADQ92934 168 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 TRIM43Q96BQ3 446 aaPredicted RBP20.67■□□□□ 0.9
DDX56-207ENST00000448192 AP5M1Q9H0R1 490 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 VTA1Q9NP79 307 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 TAF6LQ9Y6J9 622 aa20.67■□□□□ 0.9
DDX56-207ENST00000448192 E7EWF7 191 aa20.66■□□□□ 0.9
DDX56-207ENST00000448192 DYNC1LI2O43237 492 aaPredicted RBP20.66■□□□□ 0.9
DDX56-207ENST00000448192 SMPD1P17405 629 aa20.66■□□□□ 0.9
DDX56-207ENST00000448192 PTGS1P23219 599 aa20.66■□□□□ 0.9
DDX56-207ENST00000448192 MORC4Q8TE76 937 aa20.66■□□□□ 0.9
DDX56-207ENST00000448192 GNEQ9Y223 722 aaKnown RBP20.66■□□□□ 0.9
DDX56-207ENST00000448192 ELP1O95163 1332 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms