RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 MMP19Q99542 508 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 MROH8Q9H579 483 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 SRRDQ9UH36 339 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 PTCH2Q9Y6C5 1203 aa15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 V9GY48 417 aaPredicted RBP15.37■□□□□ 0.05
HLA-DOB-207ENST00000447394 OPLAHO14841 1288 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 ADORA2AP29274 412 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 GRB14Q14449 540 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 CTU1Q7Z7A3 348 aaKnown RBP15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 CCDC83Q8IWF9 413 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 PURBQ96QR8 312 aaKnown RBP15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 SLC26A6Q9BXS9 759 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 ACAD9Q9H845 621 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 LIMCH1Q9UPQ0 1083 aa15.36■□□□□ 0.05
HLA-DOB-207ENST00000447394 ST18O60284 1047 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 COBLO75128 1261 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 FCER1AP12319 257 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 CYP2B6P20813 491 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 SMARCA1P28370 1054 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 CCL14Q16627 93 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 COL13A1Q5TAT6 717 aaPredicted RBP15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 WWC2Q6AWC2 1192 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 HEATR3Q7Z4Q2 680 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 NPLOC4Q8TAT6 608 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 USP6NLQ92738 828 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 SHISA4Q96DD7 197 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 PCDHA1Q9Y5I3 950 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 IVNS1ABPQ9Y6Y0 642 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 ABCB11O95342 1321 aa15.35■□□□□ 0.05
HLA-DOB-207ENST00000447394 CCDC196A0A1B0GTZ2 297 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 SLC15A5A6NIM6 579 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 CPLX1O14810 134 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 JAK2O60674 1132 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 ELNP15502 786 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 IFNAR1P17181 557 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 COPB2P35606 906 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 CNTN2Q02246 1040 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 MAP2K5Q13163 448 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 KCTD2Q14681 263 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 PKN1Q16512 942 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 TKFCQ3LXA3 575 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 FLRT1Q9NZU1 646 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 PTPN22Q9Y2R2 807 aa15.34■□□□□ 0.05
HLA-DOB-207ENST00000447394 ADAMTS3O15072 1205 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 TRIM32Q13049 653 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 ANKRD35Q8N283 1001 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 SOCS4Q8WXH5 440 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 FGD4Q96M96 766 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 FBXO40Q9UH90 709 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 ASTN1O14525 1302 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 CENPFP49454 3210 aa15.33■□□□□ 0.04
HLA-DOB-207ENST00000447394 DNAJC25-GNG10A0A024R161 153 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 STXBP3O00186 592 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 CALML3P27482 149 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 HOXA13P31271 388 aaPredicted RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 FOSBP53539 338 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 BAATQ14032 418 aaPredicted RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 PPP2R5BQ15173 497 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 NSUN7Q8NE18 718 aaKnown RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 RAET1EQ8TD07 263 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 SH3TC2Q8TF17 1288 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 TRIB2Q92519 343 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 TMX3Q96JJ7 454 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 APBA2Q99767 749 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 COL20A1Q9P218 1284 aa15.32■□□□□ 0.04
HLA-DOB-207ENST00000447394 SOWAHBA6NEL2 793 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 ADCY3O60266 1144 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 CFBP00751 764 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 GNRH1P01148 92 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 SCG2P13521 617 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 HOXD10P28358 340 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 RGS2P41220 211 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 NAPAP54920 295 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 ZNF792Q3KQV3 632 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 RNF207Q6ZRF8 634 aa15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.31■□□□□ 0.04
HLA-DOB-207ENST00000447394 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms