RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 BAZ2AQ9UIF9 1905 aaKnown RBP15.89■□□□□ 0.13
ERCC3-203ENST00000445889 DDAH1O94760 285 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 IPO7O95373 1038 aaKnown RBP15.89■□□□□ 0.13
ERCC3-203ENST00000445889 TECP42680 631 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 C2CD5Q86YS7 1000 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
ERCC3-203ENST00000445889 CYTH3O43739 400 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 RNASE9P60153 205 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 ENOX2Q16206 610 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PNMA1Q8ND90 353 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 ZNHIT6Q9NWK9 470 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PCDHA6Q9UN73 950 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PCDHA8Q9Y5H6 950 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PRPF6O94906 941 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 DYMQ7RTS9 669 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 CCDC42Q96M95 316 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 BCL9O00512 1426 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PAPD7Q5XG87 772 aaKnown RBP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 MMRN2Q9H8L6 949 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 KANSL2Q9H9L4 492 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 PCDHA4Q9UN74 947 aa15.88■□□□□ 0.13
ERCC3-203ENST00000445889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
ERCC3-203ENST00000445889 TOGARAM1Q9Y4F4 1720 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 ZC3H4Q9UPT8 1303 aaKnown RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 BUB1O43683 1085 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 CCNT1O60563 726 aaKnown RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 SRGNP10124 158 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 DNM2P50570 870 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 KRT83P78385 493 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 KIF5AQ12840 1032 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 CCNI2Q6ZMN8 369 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 SAP30BPQ9UHR5 308 aaKnown RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 PDS5AQ29RF7 1337 aaKnown RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 FAM170AA1A519 330 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 CYLC1P35663 651 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 MAP9Q49MG5 647 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 GIMAP8Q8ND71 665 aaPredicted RBP15.87■□□□□ 0.13
ERCC3-203ENST00000445889 MS4A14Q96JA4 679 aa15.87■□□□□ 0.13
ERCC3-203ENST00000445889 TUBBP07437 444 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 NAP1L1P55209 391 aaKnown RBP15.86■□□□□ 0.13
ERCC3-203ENST00000445889 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
ERCC3-203ENST00000445889 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 MKRN1Q9UHC7 482 aaKnown RBP15.86■□□□□ 0.13
ERCC3-203ENST00000445889 SALL4Q9UJQ4 1053 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 NOP2P46087 812 aaKnown RBP15.86■□□□□ 0.13
ERCC3-203ENST00000445889 TRAPPC10P48553 1259 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 CCT5P48643 541 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 LRRC41Q15345 812 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 KCTD16Q68DU8 428 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 CABP7Q86V35 215 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 SECISBP2LQ93073 1101 aaKnown RBP15.86■□□□□ 0.13
ERCC3-203ENST00000445889 GJA10Q969M2 543 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 MKNK2Q9HBH9 465 aa15.86■□□□□ 0.13
ERCC3-203ENST00000445889 EEF1GP26641 437 aaKnown RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 APBA1Q02410 837 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 DIXDC1Q155Q3 683 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 PTPROQ16827 1216 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 MIIPQ5JXC2 388 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 P2RX5Q93086 422 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 CRNKL1Q9BZJ0 848 aaKnown RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 TTYH3Q9C0H2 523 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 DEF6Q9H4E7 631 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 KBTBD4Q9NVX7 518 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 ARHGAP20Q9P2F6 1191 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 ZNF804BA4D1E1 1349 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 ESYT3A0FGR9 886 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 RPS6KA5O75582 802 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 MAGEA9P43362 315 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 CREG2Q8IUH2 290 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 IPO4Q8TEX9 1081 aaKnown RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 GPR101Q96P66 508 aaPredicted RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 IFIH1Q9BYX4 1025 aaKnown RBP15.85■□□□□ 0.13
ERCC3-203ENST00000445889 THAP9Q9H5L6 903 aa15.85■□□□□ 0.13
ERCC3-203ENST00000445889 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 A0A1W2PQC6 194 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 ZSCAN5CA6NGD5 496 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 RHOBTB3O94955 611 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 EIF4A3P38919 411 aaKnown RBP15.84■□□□□ 0.13
ERCC3-203ENST00000445889 TXKP42681 527 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 SIK1P57059 783 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 SPA17Q15506 151 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 TRIM9Q9C026 710 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 SEMA6BQ9H3T3 888 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 GOLGA6CA6NDK9 693 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 KCNQ2O43526 872 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 PPFIA4O75335 1185 aa15.84■□□□□ 0.13
ERCC3-203ENST00000445889 GOLGA6DP0CG33 693 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms