RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 KATNBL1Q9H079 304 aa16.23■□□□□ 0.19
PRAME-209ENST00000439106 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
PRAME-209ENST00000439106 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
PRAME-209ENST00000439106 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
PRAME-209ENST00000439106 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
PRAME-209ENST00000439106 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 USH1GQ495M9 461 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 TRIM60Q495X7 471 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 SLC39A5Q6ZMH5 540 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 GDF15Q99988 308 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 FAM184BQ9ULE4 1060 aa16.22■□□□□ 0.19
PRAME-209ENST00000439106 MYH7BA7E2Y1 1941 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
PRAME-209ENST00000439106 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
PRAME-209ENST00000439106 CDC37Q16543 378 aaPredicted RBP16.21■□□□□ 0.19
PRAME-209ENST00000439106 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 CLEC4DQ8WXI8 215 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 ANKS1AQ92625 1134 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 PHF24Q9UPV7 400 aa16.21■□□□□ 0.19
PRAME-209ENST00000439106 U3KPZ7 1027 aaPredicted RBP16.21■□□□□ 0.19
PRAME-209ENST00000439106 A0A1W2PQ45 241 aaPredicted RBP16.2■□□□□ 0.18
PRAME-209ENST00000439106 A0A1W2PQY0 241 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 CALML3P27482 149 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 SEC23AQ15436 765 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 CCDC178Q5BJE1 867 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 TMEM63BQ5T3F8 832 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
PRAME-209ENST00000439106 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
PRAME-209ENST00000439106 RNF180Q86T96 592 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
PRAME-209ENST00000439106 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 PDGFCQ9NRA1 345 aa16.2■□□□□ 0.18
PRAME-209ENST00000439106 RBM8AQ9Y5S9 174 aaKnown RBP16.2■□□□□ 0.18
PRAME-209ENST00000439106 E7EWF7 191 aa16.19■□□□□ 0.18
PRAME-209ENST00000439106 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 ADGRF4Q8IZF3 695 aa16.19■□□□□ 0.18
PRAME-209ENST00000439106 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
PRAME-209ENST00000439106 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
PRAME-209ENST00000439106 ASB14A6NK59 587 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 DUSP11O75319 330 aaKnown RBP16.18■□□□□ 0.18
PRAME-209ENST00000439106 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
PRAME-209ENST00000439106 ALDH5A1P51649 535 aaPredicted RBP16.18■□□□□ 0.18
PRAME-209ENST00000439106 TRDNQ13061 729 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 SNX17Q15036 470 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 MAP4K1Q92918 833 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
PRAME-209ENST00000439106 DOCK5Q9H7D0 1870 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 NT5C2P49902 561 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 ACLYP53396 1101 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 ANTXR2P58335 489 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 RPS6P62753 249 aaKnown RBP16.17■□□□□ 0.18
PRAME-209ENST00000439106 BEX3Q00994 111 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 KCNA10Q16322 511 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 QRICH1Q2TAL8 776 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 ASPRV1Q53RT3 343 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
PRAME-209ENST00000439106 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
PRAME-209ENST00000439106 RALYLQ86SE5 291 aaKnown RBP16.17■□□□□ 0.18
PRAME-209ENST00000439106 KLHDC9Q8NEP7 349 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
PRAME-209ENST00000439106 PDLIM7Q9NR12 457 aa16.17■□□□□ 0.18
PRAME-209ENST00000439106 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
PRAME-209ENST00000439106 CTAGE5O15320 804 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 SMPD1P17405 629 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 TNFAIP2Q03169 654 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 MB21D2Q8IYB1 491 aaPredicted RBP16.16■□□□□ 0.18
PRAME-209ENST00000439106 LRCH3Q96II8 777 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 UBE2OQ9C0C9 1292 aaKnown RBP16.16■□□□□ 0.18
PRAME-209ENST00000439106 UPF3AQ9H1J1 476 aaKnown RBP16.16■□□□□ 0.18
PRAME-209ENST00000439106 JMJD4Q9H9V9 463 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
PRAME-209ENST00000439106 STARD7Q9NQZ5 370 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
PRAME-209ENST00000439106 PQBP1O60828 265 aaKnown RBP16.15■□□□□ 0.18
PRAME-209ENST00000439106 ASGR1P07306 291 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 BMP8BP34820 402 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 GJA9P57773 515 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 TLE2Q04725 743 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 SLC35G1Q2M3R5 365 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
PRAME-209ENST00000439106 PRKAG2Q9UGJ0 569 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms