RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 QRICH1Q2TAL8 776 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 TKFCQ3LXA3 575 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 RAB11FIP4Q86YS3 637 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 ZNF654Q8IZM8 581 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 TBC1D5Q92609 795 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 CYP39A1Q9NYL5 469 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 FBXO40Q9UH90 709 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 RXRAP19793 462 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 USH1GQ495M9 461 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 MAMDC4Q6UXC1 1216 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 LENG1Q96BZ8 264 aaPredicted RBP15.49■□□□□ 0.07
LINC00399-201ENST00000439008 NEK1Q96PY6 1258 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 KATNBL1Q9H079 304 aa15.49■□□□□ 0.07
LINC00399-201ENST00000439008 LRRC37A2A6NM11 1700 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 ERICH2A1L162 156 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 OPLAHO14841 1288 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 ADCY6O43306 1168 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 FARP2O94887 1054 aaPredicted RBP15.48■□□□□ 0.07
LINC00399-201ENST00000439008 CNGA1P29973 690 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 BAATQ14032 418 aaPredicted RBP15.48■□□□□ 0.07
LINC00399-201ENST00000439008 RNF20Q5VTR2 975 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 NSMFQ6X4W1 530 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 SLC30A10Q6XR72 485 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 PAWRQ96IZ0 340 aaKnown RBP15.48■□□□□ 0.07
LINC00399-201ENST00000439008 TMEM87BQ96K49 555 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 MTA3Q9BTC8 594 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 USP26Q9BXU7 913 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 RIOX1Q9H6W3 641 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 SLC5A4Q9NY91 659 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 DDX20Q9UHI6 824 aaKnown RBP15.48■□□□□ 0.07
LINC00399-201ENST00000439008 BRPF3Q9ULD4 1205 aa15.48■□□□□ 0.07
LINC00399-201ENST00000439008 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
LINC00399-201ENST00000439008 PLEKHA8P1O95397 391 aa15.47■□□□□ 0.07
LINC00399-201ENST00000439008 LIFRP42702 1097 aa15.47■□□□□ 0.07
LINC00399-201ENST00000439008 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
LINC00399-201ENST00000439008 ZNF467Q7Z7K2 595 aaPredicted RBP15.47■□□□□ 0.07
LINC00399-201ENST00000439008 CCDC144CPQ8IYA2 1237 aa15.47■□□□□ 0.07
LINC00399-201ENST00000439008 PIGSQ96S52 555 aa15.47■□□□□ 0.07
LINC00399-201ENST00000439008 PFASO15067 1338 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 SYNGAP1Q96PV0 1343 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 SEPT4O43236 478 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 PTGS1P23219 599 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
LINC00399-201ENST00000439008 TMEM63BQ5T3F8 832 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 ARMCX2Q7L311 632 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 DHX32Q7L7V1 743 aaKnown RBP15.46■□□□□ 0.07
LINC00399-201ENST00000439008 CATIPQ7Z7H3 387 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 SGMS1Q86VZ5 419 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.07
LINC00399-201ENST00000439008 NUP133Q8WUM0 1156 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.46■□□□□ 0.07
LINC00399-201ENST00000439008 COL20A1Q9P218 1284 aa15.46■□□□□ 0.07
LINC00399-201ENST00000439008 DHX16O60231 1041 aaKnown RBP15.45■□□□□ 0.06
LINC00399-201ENST00000439008 DDAH1O94760 285 aa15.45■□□□□ 0.06
LINC00399-201ENST00000439008 REC8O95072 547 aa15.45■□□□□ 0.06
LINC00399-201ENST00000439008 COL6A1P12109 1028 aa15.45■□□□□ 0.06
LINC00399-201ENST00000439008 RPS6P62753 249 aaKnown RBP15.45■□□□□ 0.06
LINC00399-201ENST00000439008 FBXO11Q86XK2 927 aa15.45■□□□□ 0.06
LINC00399-201ENST00000439008 SRBD1Q8N5C6 995 aaKnown RBP15.45■□□□□ 0.06
LINC00399-201ENST00000439008 PIBF1Q8WXW3 757 aa15.45■□□□□ 0.06
LINC00399-201ENST00000439008 JAKMIP1Q96N16 626 aaKnown RBP15.45■□□□□ 0.06
LINC00399-201ENST00000439008 PTPDC1A2A3K4 754 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 ZBTB5O15062 677 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 SEC24BO95487 1268 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 CALML3P27482 149 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 ACVR2BQ13705 512 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 APOA5Q6Q788 366 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 NFXL1Q6ZNB6 911 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 HOMER1Q86YM7 354 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 MSL3Q8N5Y2 521 aaKnown RBP15.44■□□□□ 0.06
LINC00399-201ENST00000439008 MORC4Q8TE76 937 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 MAP3K14Q99558 947 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
LINC00399-201ENST00000439008 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 NRBP1Q9UHY1 535 aa15.44■□□□□ 0.06
LINC00399-201ENST00000439008 RANBP2P49792 3224 aaKnown RBP15.43■□□□□ 0.06
LINC00399-201ENST00000439008 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.43■□□□□ 0.06
LINC00399-201ENST00000439008 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 ALDH5A1P51649 535 aaPredicted RBP15.43■□□□□ 0.06
LINC00399-201ENST00000439008 KRT32Q14532 448 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 GJC2Q5T442 439 aaPredicted RBP15.43■□□□□ 0.06
LINC00399-201ENST00000439008 RNF207Q6ZRF8 634 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 ANKLE1Q8NAG6 615 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 PDGFCQ9NRA1 345 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 ABCB11O95342 1321 aa15.43■□□□□ 0.06
LINC00399-201ENST00000439008 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 MYADML2A6NDP7 307 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 PGK1P00558 417 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 FUT2Q10981 343 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 LRRC41Q15345 812 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 CCDC144BQ3MJ40 725 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 TAPT1Q6NXT6 567 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 Q6ZUG5 572 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 EEPD1Q7L9B9 569 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 MICU3Q86XE3 530 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 FANCBQ8NB91 859 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 RGS22Q8NE09 1264 aa15.42■□□□□ 0.06
LINC00399-201ENST00000439008 SYTL5Q8TDW5 730 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms