RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 DHX16O60231 1041 aaKnown RBP21.41■■□□□ 1.02
HMGN1-207ENST00000436324 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
HMGN1-207ENST00000436324 SEC23AQ15436 765 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 USH1GQ495M9 461 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 ASPRV1Q53RT3 343 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 NCOA7Q8NI08 942 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 ESYT1Q9BSJ8 1104 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 ABHD16BQ9H3Z7 469 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 VAT1LQ9HCJ6 419 aa21.41■■□□□ 1.02
HMGN1-207ENST00000436324 ASB14A6NK59 587 aa21.4■■□□□ 1.02
HMGN1-207ENST00000436324 IFIT3O14879 490 aaKnown RBP21.4■■□□□ 1.02
HMGN1-207ENST00000436324 CCDC144BQ3MJ40 725 aa21.4■■□□□ 1.02
HMGN1-207ENST00000436324 RNF180Q86T96 592 aa21.4■■□□□ 1.02
HMGN1-207ENST00000436324 ADGRF4Q8IZF3 695 aa21.4■■□□□ 1.02
HMGN1-207ENST00000436324 LSG1Q9H089 658 aaKnown RBP21.4■■□□□ 1.02
HMGN1-207ENST00000436324 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.02
HMGN1-207ENST00000436324 ASTN1O14525 1302 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 CALML3P27482 149 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 RTP1P59025 263 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 CDC37Q16543 378 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-207ENST00000436324 BMP2KLQ5H9B9 411 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 EEPD1Q7L9B9 569 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 STAG2Q8N3U4 1231 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 CLEC4DQ8WXI8 215 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 SENP2Q9HC62 589 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 ATP11BQ9Y2G3 1177 aa21.39■■□□□ 1.01
HMGN1-207ENST00000436324 CEP290O15078 2479 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 ERICH2A1L162 156 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 ADCY6O43306 1168 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-207ENST00000436324 SLC30A10Q6XR72 485 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 SLC39A5Q6ZMH5 540 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 ANO2Q9NQ90 1003 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 PNMA2Q9UL42 364 aa21.38■■□□□ 1.01
HMGN1-207ENST00000436324 WDR19Q8NEZ3 1342 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 SYNRGQ9UMZ2 1314 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.37■■□□□ 1.01
HMGN1-207ENST00000436324 ADAMTS4O75173 837 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 WTAPQ15007 396 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 RNF207Q6ZRF8 634 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 NOL8Q76FK4 1167 aaKnown RBP21.37■■□□□ 1.01
HMGN1-207ENST00000436324 KATNBL1Q9H079 304 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 PHF24Q9UPV7 400 aa21.37■■□□□ 1.01
HMGN1-207ENST00000436324 MYADML2A6NDP7 307 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 DUSP11O75319 330 aaKnown RBP21.36■■□□□ 1.01
HMGN1-207ENST00000436324 NEFLP07196 543 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 ANTXR2P58335 489 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 SART3Q15020 963 aaKnown RBP21.36■■□□□ 1.01
HMGN1-207ENST00000436324 QRICH1Q2TAL8 776 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 TMEM67Q5HYA8 995 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 FBXO16Q8IX29 292 aaPredicted RBP21.36■■□□□ 1.01
HMGN1-207ENST00000436324 JMJD4Q9H9V9 463 aa21.36■■□□□ 1.01
HMGN1-207ENST00000436324 KLRF2D3W0D1 207 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 SLC27A2O14975 620 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 C6orf222P0C671 652 aaPredicted RBP21.35■■□□□ 1.01
HMGN1-207ENST00000436324 MAGEA10P43363 369 aaPredicted RBP21.35■■□□□ 1.01
HMGN1-207ENST00000436324 TNFAIP2Q03169 654 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 KCNA10Q16322 511 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 TRIM60Q495X7 471 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 MB21D2Q8IYB1 491 aaPredicted RBP21.35■■□□□ 1.01
HMGN1-207ENST00000436324 PRO3102Q9H379 93 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 PDGFCQ9NRA1 345 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 ADD3Q9UEY8 706 aaKnown RBP21.35■■□□□ 1.01
HMGN1-207ENST00000436324 MAD2L2Q9UI95 211 aa21.35■■□□□ 1.01
HMGN1-207ENST00000436324 MCM3APO60318 1980 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 SLC34A2O95436 690 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 PTGS1P23219 599 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 ALDH5A1P51649 535 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-207ENST00000436324 RPS6P62753 249 aaKnown RBP21.34■■□□□ 1.01
HMGN1-207ENST00000436324 CREB3L3Q68CJ9 461 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 FBXO11Q86XK2 927 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 KLHDC9Q8NEP7 349 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 TBC1D5Q92609 795 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 SPC25Q9HBM1 224 aa21.34■■□□□ 1.01
HMGN1-207ENST00000436324 GPHNQ9NQX3 736 aaPredicted RBP21.34■■□□□ 1.01
HMGN1-207ENST00000436324 ABCB11O95342 1321 aa21.33■■□□□ 1.01
HMGN1-207ENST00000436324 A0A1W2PQ45 241 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-207ENST00000436324 A0A1W2PQY0 241 aa21.33■■□□□ 1.01
HMGN1-207ENST00000436324 MDM2Q00987 491 aaPredicted RBP21.33■■□□□ 1.01
HMGN1-207ENST00000436324 GRM4Q14833 912 aa21.33■■□□□ 1.01
HMGN1-207ENST00000436324 IGDCC4Q8TDY8 1250 aa21.33■■□□□ 1.01
HMGN1-207ENST00000436324 GDF15Q99988 308 aa21.33■■□□□ 1.01
HMGN1-207ENST00000436324 PALM3A6NDB9 673 aaPredicted RBP21.32■■□□□ 1
HMGN1-207ENST00000436324 PRC1O43663 620 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 CDC45O75419 566 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 FXR1P51114 621 aaKnown RBP eCLIP21.32■■□□□ 1
HMGN1-207ENST00000436324 ACLYP53396 1101 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 TMEM63BQ5T3F8 832 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 TAPT1Q6NXT6 567 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 CASC1Q6TDU7 716 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 CATIPQ7Z7H3 387 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 NUP133Q8WUM0 1156 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 TSEN34Q9BSV6 310 aaKnown RBP21.32■■□□□ 1
HMGN1-207ENST00000436324 PRDM5Q9NQX1 630 aaPredicted RBP21.32■■□□□ 1
HMGN1-207ENST00000436324 PRKAG2Q9UGJ0 569 aa21.32■■□□□ 1
HMGN1-207ENST00000436324 SMPD1P17405 629 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 GJA9P57773 515 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 BEX3Q00994 111 aa21.31■■□□□ 1
HMGN1-207ENST00000436324 COL9A3Q14050 684 aaPredicted RBP21.31■■□□□ 1
HMGN1-207ENST00000436324 SNX17Q15036 470 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms