RNA–Protein interactions for RNA: ENST00000434583.5

TRNT1-208, Transcript of tRNA nucleotidyl transferase 1, human

TSL 2

Gene TRNT1, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRNT1-208	ENST00000434583	PRKAB2	O43741	272 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	BAIAP3	O94812	1187 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	NDUFB10	O96000	172 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	CSPP1	Q1MSJ5	1256 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	TKFC	Q3LXA3	575 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	KRT40	Q6A162	431 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	DEFB128	Q7Z7B8	93 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	FAM178B	Q8IXR5	827 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	GJD3	Q8N144	294 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	TMEM57	Q8N5G2	664 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	RETREG2	Q8NC44	543 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	CLUAP1	Q96AJ1	413 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	ACAD9	Q9H845	621 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	CD320	Q9NPF0	282 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	TNKS	O95271	1327 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	GOLIM4	O00461	696 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	PITPNM1	O00562	1244 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	LPXN	O60711	386 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	MBD4	O95243	580 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	SMPD1	P17405	629 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	ADD2	P35612	726 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	PSMC6	P62333	389 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	CNTN2	Q02246	1040 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	PUS10	Q3MIT2	529 aa	Known RBP	11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	LEXM	Q3ZCV2	418 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	KIFC2	Q96AC6	838 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	TNN	Q9UQP3	1299 aa		11.66	□□□□□ -0.54
TRNT1-208	ENST00000434583	ZBED9	Q6R2W3	1325 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	CYP2D7	A0A087X1C5	515 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	SOWAHB	A6NEL2	793 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	VTA1	Q9NP79	307 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	COG6	Q9Y2V7	657 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	PTPRS	Q13332	1948 aa		11.65	□□□□□ -0.54
TRNT1-208	ENST00000434583	CYP2C9	P11712	490 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	NHLH1	Q02575	133 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	PTPN11	Q06124	597 aa	Predicted RBP	11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	BFSP2	Q13515	415 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	ZKSCAN2	Q63HK3	967 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	TAPT1	Q6NXT6	567 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	CTR9	Q6PD62	1173 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	MKL1	Q969V6	931 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	DNAJC2	Q99543	621 aa	Known RBP	11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	UBE2Z	Q9H832	354 aa	Predicted RBP	11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	SI	P14410	1827 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	SCN10A	Q9Y5Y9	1956 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	TRANK1	O15050	2925 aa		11.64	□□□□□ -0.55
TRNT1-208	ENST00000434583	IQCF3	P0C7M6	154 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	KCNJ6	P48051	423 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	SBK1	Q52WX2	424 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	UIMC1	Q96RL1	719 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	A1CF	Q9NQ94	594 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	GPHN	Q9NQX3	736 aa	Predicted RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	TRMT13	Q9NUP7	481 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	CLIP2	Q9UDT6	1046 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	SLC4A4	Q9Y6R1	1079 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	CHD7	Q9P2D1	2997 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	TRIP12	Q14669	1992 aa	Predicted RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	LOC102724159	A0A0B4J2E5	919 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	KPNA6	O60684	536 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	ARHGEF15	O94989	841 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	RASA1	P20936	1047 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	SSTR3	P32745	418 aa	Predicted RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	CPT1A	P50416	773 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	PURA	Q00577	322 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	PWP2	Q15269	919 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	UBE3C	Q15386	1083 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	DUSP28	Q4G0W2	176 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	CLASRP	Q8N2M8	674 aa	Known RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	GMCL1P1	Q8NEA9	526 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	MORC4	Q8TE76	937 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	CHURC1	Q8WUH1	139 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	MTG1	Q9BT17	334 aa	Predicted RBP	11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	C1orf115	Q9H7X2	142 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	MKNK2	Q9HBH9	465 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	HOMER2	Q9NSB8	354 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	RNF146	Q9NTX7	359 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	ZNF536	O15090	1300 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	BRWD1	Q9NSI6	2320 aa		11.63	□□□□□ -0.55
TRNT1-208	ENST00000434583	PARN	O95453	639 aa	Known RBP	11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	BRDT	Q58F21	947 aa	Predicted RBP	11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	NFRKB	Q6P4R8	1299 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	KIAA1211	Q6ZU35	1233 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	FAM160B2	Q86V87	743 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	CCDC155	Q8N6L0	562 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	RHPN1	Q8TCX5	695 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	FBXL18	Q96ME1	805 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	ZNF287	Q9HBT7	754 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	PDGFC	Q9NRA1	345 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	PAG1	Q9NWQ8	432 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	TET1	Q8NFU7	2136 aa		11.62	□□□□□ -0.55
TRNT1-208	ENST00000434583	IGKV6D-41	A0A0C4DH26	115 aa		11.61	□□□□□ -0.55
TRNT1-208	ENST00000434583	DCX	O43602	365 aa		11.61	□□□□□ -0.55
TRNT1-208	ENST00000434583	BMP3	P12645	472 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms