RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CALM3P0DP25 149 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 PRKAR2AP13861 404 aaKnown RBP21.38■■□□□ 1.01
HLA-F-220ENST00000434407 CPA1P15085 419 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 RPS6KB1P23443 525 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 SMARCA1P28370 1054 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 QRICH1Q2TAL8 776 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 MFSD14CQ5VZR4 134 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 APOA5Q6Q788 366 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 ANKRD35Q8N283 1001 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 NUP133Q8WUM0 1156 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 CLEC4DQ8WXI8 215 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 IL17RAQ96F46 866 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 FGD4Q96M96 766 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 ZSWIM6Q9HCJ5 1215 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 SLC12A7Q9Y666 1083 aa21.38■■□□□ 1.01
HLA-F-220ENST00000434407 PFASO15067 1338 aa21.37■■□□□ 1.01
HLA-F-220ENST00000434407 KIF5BP33176 963 aa21.37■■□□□ 1.01
HLA-F-220ENST00000434407 ZNF467Q7Z7K2 595 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-220ENST00000434407 MSL3Q8N5Y2 521 aaKnown RBP21.37■■□□□ 1.01
HLA-F-220ENST00000434407 FAM133AQ8N9E0 248 aa21.37■■□□□ 1.01
HLA-F-220ENST00000434407 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-220ENST00000434407 MAF1Q9H063 256 aa21.37■■□□□ 1.01
HLA-F-220ENST00000434407 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-220ENST00000434407 BRPF3Q9ULD4 1205 aa21.37■■□□□ 1.01
HLA-F-220ENST00000434407 SEC24BO95487 1268 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 CASTP20810 708 aaKnown RBP21.36■■□□□ 1.01
HLA-F-220ENST00000434407 CYP2C19P33261 490 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 GJA8P48165 433 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 RCAN1P53805 252 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 MAMDC4Q6UXC1 1216 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 RGS22Q8NE09 1264 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 LZTS2Q9BRK4 669 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 SPZ1Q9BXG8 430 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.36■■□□□ 1.01
HLA-F-220ENST00000434407 VAT1LQ9HCJ6 419 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 CYP39A1Q9NYL5 469 aa21.36■■□□□ 1.01
HLA-F-220ENST00000434407 NFIBO00712 420 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 ZBTB5O15062 677 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 CYBAP13498 195 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 CAPN2P17655 700 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 GNAQP50148 359 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 ANAPC15P60006 121 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 RUFY3Q7L099 469 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 FBXO11Q86XK2 927 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 TINF2Q9BSI4 451 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 NRBP1Q9UHY1 535 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
HLA-F-220ENST00000434407 FRMPD3Q5JV73 1810 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 ABCB11O95342 1321 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 SYNGAP1Q96PV0 1343 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 DHX16O60231 1041 aaKnown RBP21.34■■□□□ 1.01
HLA-F-220ENST00000434407 PPP1R11O60927 126 aaPredicted RBP21.34■■□□□ 1.01
HLA-F-220ENST00000434407 SGPL1O95470 568 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
HLA-F-220ENST00000434407 CNTN2Q02246 1040 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 Q6ZUG5 572 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 SRBD1Q8N5C6 995 aaKnown RBP21.34■■□□□ 1.01
HLA-F-220ENST00000434407 TRPV1Q8NER1 839 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 CRISPLD2Q9H0B8 497 aa21.34■■□□□ 1.01
HLA-F-220ENST00000434407 POTEB2H3BUK9 544 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 RXRAP19793 462 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1.01
HLA-F-220ENST00000434407 EVCP57679 992 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 USH1GQ495M9 461 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 SYNE3Q6ZMZ3 975 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 MICU3Q86XE3 530 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 U2AF1L4Q8WU68 220 aaKnown RBP21.33■■□□□ 1.01
HLA-F-220ENST00000434407 PIGSQ96S52 555 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 AMNQ9BXJ7 453 aa21.33■■□□□ 1.01
HLA-F-220ENST00000434407 TNRC18O15417 2968 aaPredicted RBP21.33■■□□□ 1
HLA-F-220ENST00000434407 ASTN1O14525 1302 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 PNMA6FA0A0J9YX94 578 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 SOWAHBA6NEL2 793 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 ZBTB43O43298 467 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 PLEKHA8P1O95397 391 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 BAATQ14032 418 aaPredicted RBP21.32■■□□□ 1
HLA-F-220ENST00000434407 NSMFQ6X4W1 530 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 TMTC3Q6ZXV5 915 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 BRF1Q92994 677 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 DEFB118Q96PH6 123 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 MRPL11Q9Y3B7 192 aaKnown RBP21.32■■□□□ 1
HLA-F-220ENST00000434407 CYP46A1Q9Y6A2 500 aa21.32■■□□□ 1
HLA-F-220ENST00000434407 KLF18A0A0U1RQI7 1052 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 SNAI1O95863 264 aaPredicted RBP21.31■■□□□ 1
HLA-F-220ENST00000434407 GHRHRQ02643 423 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 LHX8Q68G74 356 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 CCDC144CPQ8IYA2 1237 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 FAM217BQ9NTX9 383 aaPredicted RBP21.31■■□□□ 1
HLA-F-220ENST00000434407 RBM28Q9NW13 759 aaKnown RBP21.31■■□□□ 1
HLA-F-220ENST00000434407 NID2Q14112 1375 aa21.31■■□□□ 1
HLA-F-220ENST00000434407 OPLAHO14841 1288 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 RPS6P62753 249 aaKnown RBP21.3■■□□□ 1
HLA-F-220ENST00000434407 FGD1P98174 961 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 APOBRQ0VD83 1088 aa21.3■■□□□ 1
HLA-F-220ENST00000434407 FUT2Q10981 343 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms