RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 USP6NLQ92738 828 aa17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 PIGSQ96S52 555 aa17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 GABRQQ9UN88 632 aa17.06■□□□□ 0.32
TNFAIP3-204ENST00000433680 HOXC6P09630 235 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 ADORA2AP29274 412 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 CDC27P30260 824 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 SLC35G1Q2M3R5 365 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 HOMER1Q86YM7 354 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 ANKRD35Q8N283 1001 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 PXYLP1Q8TE99 480 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 HOMER2Q9NSB8 354 aa17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 FAM217BQ9NTX9 383 aaPredicted RBP17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 MRPL11Q9Y3B7 192 aaKnown RBP17.05■□□□□ 0.32
TNFAIP3-204ENST00000433680 DOCK3Q8IZD9 2030 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 ZNFX1Q9P2E3 1918 aaKnown RBP17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 PFASO15067 1338 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 ADD1P35611 737 aaKnown RBP17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 USH1GQ495M9 461 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 CPLX2Q6PUV4 134 aaKnown RBP17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 SLAIN1Q8ND83 568 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 DDX11Q96FC9 970 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 APBA2Q99767 749 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 MCOLN1Q9GZU1 580 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 DIS3Q9Y2L1 958 aaKnown RBP17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 PTCH2Q9Y6C5 1203 aa17.04■□□□□ 0.32
TNFAIP3-204ENST00000433680 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 RBBP6Q7Z6E9 1792 aaKnown RBP17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 ADCY3O60266 1144 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 ST18O60284 1047 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 FUT2Q10981 343 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 MCF2L2Q86YR7 1114 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 SAMD3Q8N6K7 520 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 SLKQ9H2G2 1235 aaPredicted RBP17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 TPCN1Q9ULQ1 816 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
TNFAIP3-204ENST00000433680 PLXNA1Q9UIW2 1896 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 hCG_1984214I3L0E3 225 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 CPLX1O14810 134 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 PFKFB2O60825 505 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 IFNAR1P17181 557 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 CYP2B6P20813 491 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 MUM1L1Q5H9M0 696 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 ZNF713Q8N859 430 aaPredicted RBP17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 LARP6Q9BRS8 491 aaKnown RBP17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 A1CFQ9NQ94 594 aaKnown RBP17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 MAP3K20Q9NYL2 800 aaKnown RBP17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
TNFAIP3-204ENST00000433680 DNAJC25-GNG10A0A024R161 153 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 PPP1R11O60927 126 aaPredicted RBP17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 CDKL5O76039 1030 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 GRK4P32298 578 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 STK3Q13188 491 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 NTRK3Q16288 839 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 SLC9C1Q4G0N8 1177 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 CYP39A1Q9NYL5 469 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 V9GY48 417 aaPredicted RBP17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
TNFAIP3-204ENST00000433680 POTEB2H3BUK9 544 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 NFIBO00712 420 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 PRPF3O43395 683 aaKnown RBP17■□□□□ 0.31
TNFAIP3-204ENST00000433680 COBLO75128 1261 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 MCM2P49736 904 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 GHRHRQ02643 423 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 ZNF792Q3KQV3 632 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 OLFML2BQ68BL8 750 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 NSMFQ6X4W1 530 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
TNFAIP3-204ENST00000433680 TEX2Q8IWB9 1127 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 TRIM22Q8IYM9 498 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
TNFAIP3-204ENST00000433680 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
TNFAIP3-204ENST00000433680 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
TNFAIP3-204ENST00000433680 BAZ2BQ9UIF8 2168 aaKnown RBP17■□□□□ 0.31
TNFAIP3-204ENST00000433680 HMGCRP04035 888 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 PGK2P07205 417 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 SCRN1Q12765 414 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 ME3Q16798 604 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 PPP1R18Q6NYC8 613 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 NPLOC4Q8TAT6 608 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 MAML3Q96JK9 1138 aa16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 SH2B1Q9NRF2 756 aaPredicted RBP16.99■□□□□ 0.31
TNFAIP3-204ENST00000433680 LOC102724159A0A0B4J2E5 919 aa16.98■□□□□ 0.31
TNFAIP3-204ENST00000433680 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
TNFAIP3-204ENST00000433680 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
TNFAIP3-204ENST00000433680 RPS6P62753 249 aaKnown RBP16.98■□□□□ 0.31
TNFAIP3-204ENST00000433680 UBXN2AP68543 259 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms