RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SLC27A2O14975 620 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ASAP2O43150 1006 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TRAPPC3O43617 180 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TLL1O43897 1013 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 HNRNPCL1O60812 293 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ALDH1L1O75891 902 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RNF8O76064 485 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TRIM37O94972 964 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TROVE2P10155 538 aaKnown RBP eCLIP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 SKIP12755 728 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 VCAM1P19320 739 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 GJA8P48165 433 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RASSF2P50749 326 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 PLCD1P51178 756 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NDUFA8P51970 172 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RBM5P52756 815 aaKnown RBP eCLIP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCT2P78371 535 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP2B2Q01814 1243 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CUL1Q13616 776 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CUL4BQ13620 913 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CLUL1Q15846 466 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ODF2Q5BJF6 829 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CFAP70Q5T0N1 1121 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 HIBCHQ6NVY1 386 aaPredicted RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 IRGCQ6NXR0 463 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CEP128Q6ZU80 1094 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ARMCX6Q7L4S7 300 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 LINC00301Q8NCQ3 95 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATL2Q8NHH9 583 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 PI4K2BQ8TCG2 481 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RHPN1Q8TCX5 695 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 FBXO41Q8TF61 875 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NLRP7Q8WX94 980 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 BORCS6Q96GS4 357 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NAF1Q96HR8 494 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 FGD4Q96M96 766 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NUP58Q9BVL2 599 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 MMADHCQ9H3L0 296 aaPredicted RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 GOLPH3LQ9H4A5 285 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TAF1DQ9H5J8 278 aaPredicted RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 RABEP2Q9H5N1 569 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 C14orf93Q9H972 538 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 PRDM16Q9HAZ2 1276 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 SENP2Q9HC62 589 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 HAUS2Q9NVX0 235 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NDUFA13Q9P0J0 144 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 WDR35Q9P2L0 1181 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 PCDHA7Q9UN72 937 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPLO60437 1756 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZMYM6O95789 1325 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZC3H4Q9UPT8 1303 aaKnown RBP6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 TULP4Q9NRJ4 1543 aa6.2□□□□□ -1.42
VTI1BP4-201ENST00000427516 NCAPD2Q15021 1401 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PTPDC1A2A3K4 754 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 GRID2IPA4D2P6 1211 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCT8L1PA6NM43 557 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 RNF223E7ERA6 249 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 AGPSO00116 658 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CHL1O00533 1208 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 N4BP3O15049 544 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 GFRA3O60609 400 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SURF6O75683 361 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PDHBP11177 359 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CPA3P15088 417 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PFKFB1P16118 471 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ACADSP16219 412 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF18P17022 549 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 EIF2S2P20042 333 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PCK1P35558 622 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 TNNC1P63316 161 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 KIF5AQ12840 1032 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PABPC4Q13310 644 aaKnown RBP eCLIP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 TRIM29Q14134 588 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 KPNB1Q14974 876 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPA17Q15506 151 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 GSTA3Q16772 222 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPATA1Q5VX52 437 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ANO1Q5XXA6 986 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC174Q6PII3 467 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC4A10Q6U841 1118 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 GPIHBP1Q8IV16 184 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 FBXL16Q8N461 479 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 RNF10Q8N5U6 811 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 TSPYL6Q8N831 410 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 C8orf58Q8NAV2 365 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 LSM14AQ8ND56 463 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 STKLD1Q8NE28 680 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SMCR8Q8TEV9 937 aaPredicted RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZNF526Q8TF50 670 aaPredicted RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 RSPH1Q8WYR4 309 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 IRGQQ8WZA9 623 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 EMID1Q96A84 441 aaPredicted RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 STAMBPL1Q96FJ0 436 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CHMP6Q96FZ7 201 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms