RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 ADGRF4Q8IZF3 695 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 CLEC4DQ8WXI8 215 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 FERMT2Q96AC1 680 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 GDF15Q99988 308 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.4
LINC01238-202ENST00000426962 MAF1Q9H063 256 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 KATNBL1Q9H079 304 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 SPC25Q9HBM1 224 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.4
LINC01238-202ENST00000426962 PHF24Q9UPV7 400 aa12.58□□□□□ -0.4
LINC01238-202ENST00000426962 RBM8AQ9Y5S9 174 aaKnown RBP12.58□□□□□ -0.4
LINC01238-202ENST00000426962 LOC102724159A0A0B4J2E5 919 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 A0A1W2PPC1 479 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 ADAMTS4O75173 837 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 RTP1P59025 263 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 SART3Q15020 963 aaKnown RBP12.57□□□□□ -0.4
LINC01238-202ENST00000426962 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
LINC01238-202ENST00000426962 C1orf53Q5VUE5 145 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 RNF207Q6ZRF8 634 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 RGS22Q8NE09 1264 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 MORC4Q8TE76 937 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 LENG1Q96BZ8 264 aaPredicted RBP12.57□□□□□ -0.4
LINC01238-202ENST00000426962 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
LINC01238-202ENST00000426962 LSG1Q9H089 658 aaKnown RBP12.57□□□□□ -0.4
LINC01238-202ENST00000426962 VAT1LQ9HCJ6 419 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 LAMA4Q16363 1823 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 ASTN1O14525 1302 aa12.57□□□□□ -0.4
LINC01238-202ENST00000426962 MOXD2PA6NHM9 499 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 CALML3P27482 149 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 FXR1P51114 621 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC01238-202ENST00000426962 GJA9P57773 515 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 RPS6P62753 249 aaKnown RBP12.56□□□□□ -0.4
LINC01238-202ENST00000426962 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 SNX17Q15036 470 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 KCNA10Q16322 511 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 CDC37Q16543 378 aaPredicted RBP12.56□□□□□ -0.4
LINC01238-202ENST00000426962 USH1GQ495M9 461 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 IQSEC1Q6DN90 963 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
LINC01238-202ENST00000426962 STOX1Q6ZVD7 989 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
LINC01238-202ENST00000426962 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 JMJD4Q9H9V9 463 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 PRKAG2Q9UGJ0 569 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 MAD2L2Q9UI95 211 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 ATP11BQ9Y2G3 1177 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 TAF6LQ9Y6J9 622 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 SYNRGQ9UMZ2 1314 aa12.56□□□□□ -0.4
LINC01238-202ENST00000426962 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 DNAH12Q6ZR08 3092 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 A0A1W2PQ45 241 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 A0A1W2PQY0 241 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 ADCY6O43306 1168 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 DHX16O60231 1041 aaKnown RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 C6orf222P0C671 652 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 CST5P28325 142 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 MAGEA10P43363 369 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 ACLYP53396 1101 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 NKX3-2P78367 333 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 WTAPQ15007 396 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 QRICH1Q2TAL8 776 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 TAPT1Q6NXT6 567 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 NOL8Q76FK4 1167 aaKnown RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 CHST3Q7LGC8 479 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 FBXO11Q86XK2 927 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 DNERQ8NFT8 737 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 UPF3AQ9H1J1 476 aaKnown RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 VTA1Q9NP79 307 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
LINC01238-202ENST00000426962 Q9Y3F1 56 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 ABCB11O95342 1321 aa12.55□□□□□ -0.4
LINC01238-202ENST00000426962 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 B4DLN1 442 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 TRIM60Q495X7 471 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 TMEM67Q5HYA8 995 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 GNASQ5JWF2 1037 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 MB21D2Q8IYB1 491 aaPredicted RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
LINC01238-202ENST00000426962 LBHD1Q9BQE6 289 aaPredicted RBP12.54□□□□□ -0.4
LINC01238-202ENST00000426962 MTA3Q9BTC8 594 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms