RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 PTPDC1A2A3K4 754 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 ASB14A6NK59 587 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 NFIBO00712 420 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 USH1GQ495M9 461 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 ADGRF4Q8IZF3 695 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 SENP6Q9GZR1 1112 aaPredicted RBP16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 XPNPEP3Q9NQH7 507 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
NCKIPSD-205ENST00000426678 SOWAHBA6NEL2 793 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 ANTXR2P58335 489 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 BAATQ14032 418 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 CATIPQ7Z7H3 387 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 C7orf61Q8IZ16 206 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 ABCB11O95342 1321 aa16.95■□□□□ 0.3
NCKIPSD-205ENST00000426678 LCTP09848 1927 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 KLRF2D3W0D1 207 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 PRC1O43663 620 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 CALML3P27482 149 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 MCM5P33992 734 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 GRM4Q14833 912 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 LRRC41Q15345 812 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 RNF180Q86T96 592 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 CLEC4DQ8WXI8 215 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 MTA3Q9BTC8 594 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 JMJD4Q9H9V9 463 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
NCKIPSD-205ENST00000426678 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 CEP290O15078 2479 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 PGK1P00558 417 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 SLC30A10Q6XR72 485 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 FBXO11Q86XK2 927 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 IGDCC4Q8TDY8 1250 aa16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-205ENST00000426678 PALM3A6NDB9 673 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 DUSP11O75319 330 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 ALDH5A1P51649 535 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 RPS6P62753 249 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 TROAPQ12815 778 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 CCDC144BQ3MJ40 725 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 NFXL1Q6ZNB6 911 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 NUP133Q8WUM0 1156 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 TMEM87BQ96K49 555 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 PURBQ96QR8 312 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 LY9Q9HBG7 655 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 ASTN1O14525 1302 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
NCKIPSD-205ENST00000426678 LOC102724159A0A0B4J2E5 919 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 SH2B2O14492 632 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 DDAH1O94760 285 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 ATN1P54259 1190 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 PWP2Q15269 919 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 TMTC2Q8N394 836 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 AMNQ9BXJ7 453 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 KATNBL1Q9H079 304 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 SPC25Q9HBM1 224 aa16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-205ENST00000426678 ZBTB5O15062 677 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 ADAMTS4O75173 837 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 KIF5BP33176 963 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 TRAF1Q13077 416 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 EEPD1Q7L9B9 569 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 MAF1Q9H063 256 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 GPHNQ9NQX3 736 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 PHF24Q9UPV7 400 aa16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 DDX49Q9Y6V7 483 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-205ENST00000426678 B4DLN1 442 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 MRPL12P52815 198 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 TNFAIP2Q03169 654 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 PDE4DQ08499 809 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 KRT32Q14532 448 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
NCKIPSD-205ENST00000426678 DNERQ8NFT8 737 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms