RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 IGDCC4Q8TDY8 1250 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 LRRC2Q9BYS8 371 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 CYP39A1Q9NYL5 469 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 MAD2L2Q9UI95 211 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 PFASO15067 1338 aa15.92■□□□□ 0.14
SNX3-204ENST00000426155 ERICH2A1L162 156 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
SNX3-204ENST00000426155 ZNF865P0CJ78 1059 aaPredicted RBP15.91■□□□□ 0.14
SNX3-204ENST00000426155 SLC35G1Q2M3R5 365 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 SLC30A10Q6XR72 485 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 ANKLE1Q8NAG6 615 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 CLEC4DQ8WXI8 215 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 LY9Q9HBG7 655 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
SNX3-204ENST00000426155 DNAH12Q6ZR08 3092 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 SEPT4O43236 478 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 GRM4Q14833 912 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
SNX3-204ENST00000426155 QRICH1Q2TAL8 776 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 PRPF38BQ5VTL8 546 aaKnown RBP15.9■□□□□ 0.14
SNX3-204ENST00000426155 ERICH6BQ5W0A0 696 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 NECAB2Q7Z6G3 386 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 CCDC144CPQ8IYA2 1237 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 TCEANC2Q96MN5 208 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 C11orf49Q9H6J7 331 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
SNX3-204ENST00000426155 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 ZHX1Q9UKY1 873 aaPredicted RBP15.9■□□□□ 0.14
SNX3-204ENST00000426155 WDR19Q8NEZ3 1342 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 SYNGAP1Q96PV0 1343 aa15.9■□□□□ 0.14
SNX3-204ENST00000426155 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
SNX3-204ENST00000426155 KLRF2D3W0D1 207 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 SH2B2O14492 632 aaPredicted RBP15.89■□□□□ 0.13
SNX3-204ENST00000426155 ADCY6O43306 1168 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 MCM5P33992 734 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 TROAPQ12815 778 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 BAATQ14032 418 aaPredicted RBP15.89■□□□□ 0.13
SNX3-204ENST00000426155 GJC2Q5T442 439 aaPredicted RBP15.89■□□□□ 0.13
SNX3-204ENST00000426155 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
SNX3-204ENST00000426155 RAB11FIP4Q86YS3 637 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 DPF3Q92784 378 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 CNPY2Q9Y2B0 182 aa15.89■□□□□ 0.13
SNX3-204ENST00000426155 MSCO60682 206 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 PPP1R11O60927 126 aaPredicted RBP15.88■□□□□ 0.13
SNX3-204ENST00000426155 RXRAP19793 462 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 CALML3P27482 149 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 HOMER1Q86YM7 354 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 ZNF654Q8IZM8 581 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 HTATIP2Q9BUP3 242 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 KATNBL1Q9H079 304 aa15.88■□□□□ 0.13
SNX3-204ENST00000426155 CYTH3O43739 400 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 COL6A1P12109 1028 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 CPA1P15085 419 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 PTGS1P23219 599 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 IRX5P78411 483 aaPredicted RBP15.87■□□□□ 0.13
SNX3-204ENST00000426155 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 CATIPQ7Z7H3 387 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 MSL3Q8N5Y2 521 aaKnown RBP15.87■□□□□ 0.13
SNX3-204ENST00000426155 TBC1D5Q92609 795 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
SNX3-204ENST00000426155 H0YGN5 161 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 PGK1P00558 417 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 AKR1A1P14550 325 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 NFXL1Q6ZNB6 911 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 FBXO11Q86XK2 927 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
SNX3-204ENST00000426155 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 NEK1Q96PY6 1258 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 PIGSQ96S52 555 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 XPNPEP3Q9NQH7 507 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 ABCB11O95342 1321 aa15.86■□□□□ 0.13
SNX3-204ENST00000426155 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.85■□□□□ 0.13
SNX3-204ENST00000426155 DNM1LO00429 736 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 RARBP10826 455 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 CAPN2P17655 700 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 ALDH5A1P51649 535 aaPredicted RBP15.85■□□□□ 0.13
SNX3-204ENST00000426155 RPS6P62753 249 aaKnown RBP15.85■□□□□ 0.13
SNX3-204ENST00000426155 LRRC41Q15345 812 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 CCDC144BQ3MJ40 725 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 C7orf61Q8IZ16 206 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
SNX3-204ENST00000426155 PIP4P2Q8N4L2 257 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 MTMR8Q96EF0 704 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 TMEM87BQ96K49 555 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
SNX3-204ENST00000426155 ABHD16BQ9H3Z7 469 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 KIAA1217Q5T5P2 1943 aa15.85■□□□□ 0.13
SNX3-204ENST00000426155 SYNRGQ9UMZ2 1314 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms