RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CHP1Q99653 195 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 TCHPQ9BT92 498 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 LSG1Q9H089 658 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SNRKQ9NRH2 765 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 STIM2Q9P246 746 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 FRMD4BQ9Y2L6 1034 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 WDR7Q9Y4E6 1490 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SURF6O75683 361 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 FLOT1O75955 427 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 UBOX5O94941 541 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 KCNA3P22001 575 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 KCNA1Q09470 495 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 RFX8Q6ZV50 586 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ANKRD13CQ8N6S4 541 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 PPFIBP2Q8ND30 876 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 CLEC11AQ9Y240 323 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SERPINB3P29508 390 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 LACTBP83111 547 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 LINS1Q8NG48 757 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 CHMP7Q8WUX9 453 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 WDR60Q8WVS4 1066 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 RAPGEF5Q92565 580 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ECT2Q9H8V3 914 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 SCOCQ9UIL1 159 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 PNMA3Q9UL41 463 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 RBM8AQ9Y5S9 174 aaKnown RBP7.54□□□□□ -1.2
CNOT4-205ENST00000423368 ASXL1Q8IXJ9 1541 aa7.54□□□□□ -1.2
CNOT4-205ENST00000423368 PRKCIP41743 596 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FXR1P51114 621 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SKIV2LQ15477 1246 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ALDH1L2Q3SY69 923 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 EXOC3L1Q86VI1 746 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 KLHDC4Q8TBB5 520 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 MAGEC3Q8TD91 643 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FBF1Q8TES7 1133 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 PHACTR3Q96KR7 559 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FAM227BQ96M60 508 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 EPB41L5Q9HCM4 733 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 INIPQ9NRY2 104 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 MOSPD1Q9UJG1 213 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FGFR1OPO95684 399 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 MCM3P25205 808 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 LRP8Q14114 963 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC6Q16204 474 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FBXO31Q5XUX0 539 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 DAAM2Q86T65 1068 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SMYD4Q8IYR2 804 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CCDC197Q8NCU1 140 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SMC1BQ8NDV3 1235 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 NELFBQ8WX92 580 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CCT6BQ92526 530 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 VCXQ9H320 206 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 NDST4Q9H3R1 872 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ADAM22Q9P0K1 906 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 LZTS1Q9Y250 596 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SYNMO15061 1565 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CCT8L1PA6NM43 557 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 TACC1O75410 805 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CACNA2D1P54289 1103 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SKOR1P84550 965 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 G3BP1Q13283 466 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 CFAP157Q5JU67 520 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ALS2CLQ60I27 953 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 MAELQ96JY0 434 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ZMAT2Q96NC0 199 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 MTFR1LQ9H019 292 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 VPS16Q9H269 839 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 ESF1Q9H501 851 aaKnown RBP7.53□□□□□ -1.2
CNOT4-205ENST00000423368 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
CNOT4-205ENST00000423368 POLA1P09884 1462 aaPredicted RBP7.52□□□□□ -1.2
CNOT4-205ENST00000423368 GRIN2BQ13224 1484 aa7.52□□□□□ -1.2
CNOT4-205ENST00000423368 ABCC11Q96J66 1382 aa7.52□□□□□ -1.21
CNOT4-205ENST00000423368 ABCC2Q92887 1545 aa7.52□□□□□ -1.21
CNOT4-205ENST00000423368 TMEM247A6NEH6 219 aa7.52□□□□□ -1.21
CNOT4-205ENST00000423368 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-205ENST00000423368 USO1O60763 962 aaKnown RBP7.52□□□□□ -1.21
CNOT4-205ENST00000423368 NQO1P15559 274 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms